Co-expression analysis

Gene ID	Zm.9441.1.A1_at
Gene name	hypothetical protein LOC100278105
Homology with Arabidopsis	Similar to At2g33790: AGP30 (ARABINOGALACTAN PROTEIN30) (HF=1e+0)
Module size	7 genes
NF	0.21
%ile	15.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	81.1	0.81	Zm.9441.1.A1_at	AY105453.1	hypothetical protein LOC100278105	-	1e+0	At2g33790	AGP30 (ARABINOGALACTAN PROTEIN30)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.83	Zm.775.1.A1_at	BI992654	-	-	1e+0	At3g08990	yippee family protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.7750.1.S1_at	L10633.1	beta-6 tubulin	-	1e-151	At5g12250	TUB6 (BETA-6 TUBULIN)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.7750.2.S1_at	AY103542.1	Beta-6 tubulin	-	3e-155	At5g12250	TUB6 (BETA-6 TUBULIN)	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.83	Zm.4862.2.S1_at	AI666004	-	-	2e+0	At2g23920	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.80	Zm.2895.3.S1_a_at	CF017512	-	-	5e-59	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.83	Zm.5851.1.A1_at	BM337140	hypothetical protein LOC100272940	-	1e-2	At4g38630	RPN10 (REGULATORY PARTICLE NON-ATPASE 10)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.5	99.1	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
12.5	98.7	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
11.7	98.6	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
10.1	98.4	GSM162265	Wild type 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
8.6	98.1	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
7.9	97.9	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.7	97.9	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.5	96.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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