Co-expression analysis

Gene ID Zm.94.1.A1_at
Gene name Dof2
Homology with ArabidopsisSimilar to At2g28810: Dof-type zinc finger domain-containing protein (HF=1e-7)
Module size 13 genes
NF 0.52
%ile 67.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.97Zm.94.1.A1_atX79934.1Dof2-1e-7At2g28810Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.6381.10.98Zm.18416.1.A1_atCO524449hypothetical protein LOC100193203-3e-1At3g27900unknown proteinO.I.H.G.S.X.
0.6179.50.97Zm.3204.1.S1_x_atBM953397hypothetical protein LOC100278241-3e-1At1g70250receptor serine/threonine kinase, putativeO.I.H.G.S.X.
0.6179.50.98Zm.18446.1.A1_atCO518758--3e-2At1g29800phosphoinositide binding / zinc ion bindingO.I.H.G.S.X.
0.5469.80.98Zm.8751.1.A1_atBM348137--1e+0At3g05700-O.I.H.G.S.X.
0.5267.30.98Zm.6968.1.A1_atAI065873apurinic endonuclease-redox protein-2e+0At3g077503' exoribonuclease family domain 1-containing proteinO.I.H.G.S.X.
0.5267.30.98Zm.4805.1.A1_atCD441355heat shock protein 70 kDa-0At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.5065.70.97Zm.14330.1.A1_atAI712010hypothetical protein LOC100279866-9e-10At1g04850ubiquitin-associated (UBA)/TS-N domain-containing proteinO.I.H.G.S.X.
0.4759.90.97Zm.6049.1.A1_atAY103705.1--1e-1At5g02400PLL2O.I.H.G.S.X.
0.4149.70.98Zm.5976.2.S1_atBG265782--3e+0At5g4008060S ribosomal protein-relatedO.I.H.G.S.X.
0.4048.50.97Zm.10383.3.A1_atAW562601--9e-20At3g05060SAR DNA-binding protein, putativeO.I.H.G.S.X.
0.3945.60.97Zm.16306.1.A1_atAY111557.1hypothetical protein LOC100273693-2e+0At1g07140SIRANBPO.I.H.G.S.X.
0.3233.40.97Zm.749.1.S1_atAY291061.1photosystem II subunit PsbS1-8e-7At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.399.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.799.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.198.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.998.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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