Co-expression analysis

Gene ID Zm.9376.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g06330: hairpin-responsive protein, putative (HIN1) (HF=1e+0)
Module size 6 genes
NF 0.38
%ile 41.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6077.80.92Zm.9376.1.A1_atBM332576--1e+0At5g06330hairpin-responsive protein, putative (HIN1)O.I.H.G.S.X.
0.4455.70.92Zm.8239.1.A1_s_atBM073390hypothetical protein LOC100277448-5e+0At5g4643060S ribosomal protein L32 (RPL32B)O.I.H.G.S.X.
0.4251.30.91Zm.13188.1.A1_x_atAY103625.1hypothetical protein LOC100193556-5e-32At3g11940ATRPS5A (RIBOSOMAL PROTEIN 5A)O.I.H.G.S.X.
0.3233.40.92Zm.15080.1.A1_atAY103815.1--5e-65At3g554102-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putativeO.I.H.G.S.X.
0.3233.40.92Zm.8239.1.A1_atBM073390hypothetical protein LOC100277448-5e+0At5g4643060S ribosomal protein L32 (RPL32B)O.I.H.G.S.X.
0.1912.80.92Zm.13536.1.S1_atAY108312.1hypothetical protein LOC100272500-3e-1At4g19980unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM253260ZM_2d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
11.198.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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