Co-expression analysis

Gene ID Zm.9358.1.A1_at
Gene name hypothetical protein LOC100191697
Homology with ArabidopsisSimilar to At3g12190: - (HF=1e+0)
Module size 7 genes
NF 0.04
%ile 2.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.20.96Zm.9358.1.A1_atBM348583hypothetical protein LOC100191697-1e+0At3g12190-O.I.H.G.S.X.
0.2014.20.96Zm.9810.1.A1_atBM332775--6e-2At4g05340ATP bindingO.I.H.G.S.X.
0.062.30.96Zm.10652.1.S1_atCN844569hypothetical protein LOC100191856-4e-2At1g23040hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.051.90.96Zm.2976.1.S1_atAF045033.1nitrate-induced NOI protein-2e-3At2g04410-O.I.H.G.S.X.
0.041.50.97Zm.12930.1.S1_atCA403471hypothetical protein LOC100191377-3e-3At4g31790diphthine synthase, putative (DPH5)O.I.H.G.S.X.
0.020.70.97Zm.13644.1.A1_atCA400732hypothetical protein LOC100274042-9e-7At3g05910pectinacetylesterase, putativeO.I.H.G.S.X.
0.010.30.96Zm.5065.1.S1_s_atBM318796Diacylglycerol kinase 1-9e+0At2g39630glycosyl transferase family 2 proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.898.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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