Co-expression analysis

Gene ID Zm.9264.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g13190: - (HF=2e+0)
Module size 6 genes
NF 0.07
%ile 3.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.91Zm.9264.1.A1_atBM267689--2e+0At5g13190-O.I.H.G.S.X.
0.3641.30.94Zm.16498.1.S1_a_atAY103577.1hypothetical protein LOC100193260-1e-109At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.2216.90.92Zm.11469.2.A1_a_atCF630843hypothetical protein LOC100279920-4e+0At3g20900unknown proteinO.I.H.G.S.X.
0.072.90.93Zm.8864.1.A1_s_atBM269430hypothetical protein LOC100278083-6e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.062.30.91Zm.1906.1.S1_atAF239818.1protein kinase CK2 regulatory subunit CK2B3-4e-33At3g60250CKB3O.I.H.G.S.X.
0.020.70.92Zm.15894.1.A1_atBG873874--3e-14At4g27230HTA2 (histone H2A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.699.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
26.899.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
22.999.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.899.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.199.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.099.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os02g0741100, orthologous to the query gene, Zm.9264.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6583.8Os02g0741100At5g13190-Heat shock protein DnaJ2e-8At1g24120ARL1 (ARG1-LIKE 1)O.I.H.G.S.X.
0.5068.0Os01g0660300At5g13190-Pyruvate kinase isozyme G, chloroplast precursor(EC 2.7.1.40)8e-50At5g52920PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1)O.I.H.G.S.X.
0.4660.9Os08g0230200At5g13190--5e-3At1g16860merozoite surface protein-relatedO.I.H.G.S.X.
0.4660.9Os01g0969100At5g13190-Conserved hypothetical protein9e-75At1g08200AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)O.I.H.G.S.X.
0.4458.1Os08g0544500At5g13190-Conserved hypothetical protein2e-31At2g35110GRL (GNARLED)O.I.H.G.S.X.
0.4458.1Os03g0266800At5g13190-Protein kinase domain containing protein7e-27At1g31420FEI1 (FEI 1)O.I.H.G.S.X.
0.3440.0Os08g0242900At5g13190-Conserved hypothetical protein9e-7At5g57410unknown proteinO.I.H.G.S.X.
0.3032.7Os10g0519600At5g13190-Protein of unknown function DUF791 family protein8e-32At3g49310-O.I.H.G.S.X.
0.2727.5Os01g0589700At5g13190-Conserved hypothetical protein3e-1At1g55475unknown proteinO.I.H.G.S.X.
0.2321.2Os06g0561200At5g13190-Potassium/proton antiporter-like protein5e-31At2g19600ATKEA4O.I.H.G.S.X.
0.2117.9Os02g0742200At5g13190-Small GTP-binding protein OsRac38e-16At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)O.I.H.G.S.X.
0.1915.1Os03g0417900At5g13190-Vps52/Sac2 family protein2e-24At1g71270POK (POKY POLLEN TUBE)O.I.H.G.S.X.
0.127.2Os03g0126100At5g13190-C-terminal binding protein3e-46At1g01510AN (ANGUSTIFOLIA)O.I.H.G.S.X.
0.073.7Os05g0178400At5g13190-Protein phosphatase 2A B'kappa subunit3e-4At3g09880ATB' BETAO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage