Co-expression analysis

Gene ID Zm.9264.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g13190: - (HF=2e+0)
Module size 6 genes
NF 0.07
%ile 3.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.91Zm.9264.1.A1_atBM267689--2e+0At5g13190-O.I.H.G.S.X.
0.3641.30.94Zm.16498.1.S1_a_atAY103577.1hypothetical protein LOC100193260-1e-109At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.2216.90.92Zm.11469.2.A1_a_atCF630843hypothetical protein LOC100279920-4e+0At3g20900unknown proteinO.I.H.G.S.X.
0.072.90.93Zm.8864.1.A1_s_atBM269430hypothetical protein LOC100278083-6e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.062.30.91Zm.1906.1.S1_atAF239818.1protein kinase CK2 regulatory subunit CK2B3-4e-33At3g60250CKB3O.I.H.G.S.X.
0.020.70.92Zm.15894.1.A1_atBG873874--3e-14At4g27230HTA2 (histone H2A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.699.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
26.899.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
22.999.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.899.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.199.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.099.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.78593.1.S1_at, orthologous to the query gene, Zm.9264.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.99100.0GmaAffx.78593.1.S1_atAt5g13190--1e+1At4g17998unknown proteinO.I.H.G.S.X.
0.7288.1GmaAffx.43923.1.S1_atAt5g13190--8e-1At2g27340-O.I.H.G.S.X.
0.6986.8GmaAffx.88088.1.A1_atAt5g13190--4e+0At2g34840coatomer protein epsilon subunit family protein / COPE family proteinO.I.H.G.S.X.
0.6986.8Gma.3482.1.S1_atAt5g13190--3e+0At4g21080Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.6382.9Gma.5133.1.S1_atAt5g13190--6e-1At4g19550transcription regulator/ zinc ion bindingO.I.H.G.S.X.
0.6080.7Gma.13143.1.S1_atAt5g13190--2e+0At3g58340meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.5678.2GmaAffx.76839.1.S1_atAt5g13190--1e+0At2g37195unknown proteinO.I.H.G.S.X.
0.5576.3GmaAffx.23331.1.S1_atAt5g13190--7e-8At1g30300unknown proteinO.I.H.G.S.X.
0.5474.8GmaAffx.1736.1.S1_atAt5g13190--3e+0At5g57400unknown proteinO.I.H.G.S.X.
0.5374.2GmaAffx.77602.1.S1_atAt5g13190--1e+0At3g17090protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.5273.1GmaAffx.38388.1.S1_atAt5g13190--2e-1At1g06850AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)O.I.H.G.S.X.
0.5172.3Gma.233.1.S1_atAt5g13190--7e-2At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.
0.4968.3Gma.555.1.S1_atAt5g13190--2e+0At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.H.G.S.X.
0.4665.5Gma.16418.1.A1_atAt5g13190--4e-1At5g57050ABI2 (ABA INSENSITIVE 2)O.I.H.G.S.X.
0.4563.9GmaAffx.51723.1.A1_atAt5g13190--1e-16At2g41980seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.4563.9Gma.12506.1.S1_x_atAt5g13190--7e-62At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)O.I.H.G.S.X.
0.4360.6Gma.12506.1.S1_atAt5g13190--7e-62At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)O.I.H.G.S.X.
0.4360.6Gma.8175.1.A1_atAt5g13190--3e-1At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)O.I.H.G.S.X.
0.4360.6Gma.3046.1.S1_atAt5g13190--5e-20At4g22753SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE 1-3)O.I.H.G.S.X.
0.4259.3Gma.1638.1.S1_atAt5g13190--2e-3At1g23149CPuORF29 (Conserved peptide upstream open reading frame 29)O.I.H.G.S.X.
0.4158.1Gma.6784.2.A1_atAt5g13190--9e-1At1g03106unknown proteinO.I.H.G.S.X.
0.4057.1Gma.1358.1.S1_atAt5g13190--8e-1At1g07880ATMPK13O.I.H.G.S.X.
0.4057.1GmaAffx.32693.1.S1_atAt5g13190--8e-1At1g25155anthranilate synthase beta subunit, putativeO.I.H.G.S.X.
0.4057.1GmaAffx.17706.1.S1_s_atAt5g13190--1e-11At1g69330zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4057.1Gma.12451.1.S1_atAt5g13190--1e+0At4g39500CYP96A11O.I.H.G.S.X.
0.3954.5Gma.3126.1.S1_atAt5g13190--2e+0At2g33620DNA-binding family protein / AT-hook protein 1 (AHP1)O.I.H.G.S.X.
0.3954.5Gma.1467.1.S1_atAt5g13190--2e-42At4g39910ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3)O.I.H.G.S.X.
0.3853.3GmaAffx.91559.1.S1_atAt5g13190--2e+0At1g69090F-box family proteinO.I.H.G.S.X.
0.3650.8GmaAffx.91559.1.S1_s_atAt5g13190--2e+0At1g69090F-box family proteinO.I.H.G.S.X.
0.3650.8Gma.7605.1.A1_atAt5g13190--1e-27At3g58570DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.3548.6GmaAffx.50328.1.S1_atAt5g13190--3e-5At5g16110unknown proteinO.I.H.G.S.X.
0.3548.6GmaAffx.32575.3.S1_atAt5g13190--6e-10At3g59280TXR1 (THAXTOMIN A RESISTANT 1)O.I.H.G.S.X.
0.3346.1Gma.15815.1.S1_atAt5g13190--3e-76At3g15060AtRABA1g (Arabidopsis Rab GTPase homolog A1g)O.I.H.G.S.X.
0.3346.1GmaAffx.32575.3.S1_x_atAt5g13190--6e-10At3g59280TXR1 (THAXTOMIN A RESISTANT 1)O.I.H.G.S.X.
0.3346.1Gma.12124.1.S1_atAt5g13190--5e-19At4g14500-O.I.H.G.S.X.
0.3346.1Gma.9509.1.S1_atAt5g13190--1e-16At1g29400AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5)O.I.H.G.S.X.
0.2633.9GmaAffx.36562.1.S1_atAt5g13190--3e-24At2g01480unknown proteinO.I.H.G.S.X.
0.2633.9Gma.4522.1.S1_atAt5g13190--2e-3At5g03200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2430.9Gma.1970.1.S1_atAt5g13190--4e-5At4g31290ChaC-like family proteinO.I.H.G.S.X.
0.2329.9Gma.3126.1.S1_a_atAt5g13190--2e+0At2g33620DNA-binding family protein / AT-hook protein 1 (AHP1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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