Co-expression analysis

Gene ID	Zm.9255.2.S1_a_at
Gene name	hypothetical protein LOC100191322
Homology with Arabidopsis	Similar to At1g46768: RAP2.1 (related to AP2 1) (HF=1e+0)
Module size	8 genes
NF	0.02
%ile	0.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	99.3	0.80	Zm.9255.2.S1_a_at	AY107426.1	hypothetical protein LOC100191322	-	1e+0	At1g46768	RAP2.1 (related to AP2 1)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.80	ZmAffx.624.1.S1_at	AI715052	-	-	1e+1	At4g26160	ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.88	Zm.8833.1.A1_at	BM075816	-	-	2e+0	At5g18310	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	1.1	0.92	Zm.13108.1.S1_at	CA404508	hypothetical protein LOC100274397	-	1e-4	At1g16860	merozoite surface protein-related	O.I.	H.G.	S.X.	Please select
0.03	1.1	0.88	Zm.8874.1.A1_at	AY109677.1	ribonuclease P	-	4e-5	At1g76010	nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.88	ZmAffx.66.1.S1_at	AI665126	-	-	3e+0	At3g05460	sporozoite surface protein-related	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.91	Zm.3165.1.A1_at	CF633794	terpene synthase 7	-	2e+0	At3g61840	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.86	Zm.1906.1.S1_at	AF239818.1	protein kinase CK2 regulatory subunit CK2B3	-	4e-33	At3g60250	CKB3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.8	97.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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