Co-expression analysis

Gene ID Zm.9197.2.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g44460: calcium-binding protein, putative (HF=2e+0)
Module size 15 genes
NF 0.49
%ile 63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.98Zm.9197.2.A1_atCF637986--2e+0At5g44460calcium-binding protein, putativeO.I.H.G.S.X.
0.6179.50.99Zm.10517.1.S1_atCO533971hypothetical protein LOC100272293-3e-16At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeO.I.H.G.S.X.
0.5775.10.99Zm.3124.1.S1_atAY109771.1CONSTANS interacting protein 4-1e+1At5g37770TCH2 (TOUCH 2)O.I.H.G.S.X.
0.5571.60.99Zm.10540.2.A1_a_atBQ538200branched-chain-amino-acid aminotransferase-1e+0At5g65780ATBCAT-5O.I.H.G.S.X.
0.5166.40.99ZmAffx.848.1.A1_atAI770631--8e-1At1g22720wall-associated kinase, putativeO.I.H.G.S.X.
0.4861.30.99ZmAffx.962.1.A1_atAI833777hypothetical protein LOC100275523-3e-22At1g64680unknown proteinO.I.H.G.S.X.
0.4658.40.99Zm.9952.1.A1_atBM349898--6e+0At5g46115unknown proteinO.I.H.G.S.X.
0.4556.40.99Zm.1690.1.A1_atCK347441density-regulated protein-4e-17At5g11900eukaryotic translation initiation factor SUI1 family proteinO.I.H.G.S.X.
0.4455.70.99ZmAffx.886.1.A1_atAI770831--8e-1At5g22220-O.I.H.G.S.X.
0.4455.70.99Zm.17712.1.S1_atCK370052hypothetical protein LOC100275406-8e-20At5g19855unknown proteinO.I.H.G.S.X.
0.4048.50.99ZmAffx.908.1.S1_atAI770943hypothetical protein LOC100279225-8e-1At5g41720-O.I.H.G.S.X.
0.3945.60.99ZmAffx.161.1.A1_atAI668163hypothetical protein LOC100193378-3e+0At4g17560ribosomal protein L19 family proteinO.I.H.G.S.X.
0.3945.60.99Zm.18515.1.A1_atCF629792hypothetical protein LOC100191462-1e+0At1g16430surfeit locus protein 5 family protein / SURF5 family proteinO.I.H.G.S.X.
0.3336.00.99Zm.13979.1.S1_atAY106073.1hypothetical protein LOC100273275-8e-22At2g20130LCV1 (LIKE COV 1)O.I.H.G.S.X.
0.3029.80.99ZmAffx.917.1.S1_atAI782944--1e+1At5g26810pectinesterase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.398.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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