Co-expression analysis

Gene ID Zm.9191.1.A1_at
Gene name hypothetical protein LOC100279424
Homology with ArabidopsisSimilar to At4g40100: ABA-responsive protein-related (HF=6e-4)
Module size 7 genes
NF 0.53
%ile 69.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.90Zm.9191.1.A1_atBM350157hypothetical protein LOC100279424-6e-4At4g40100ABA-responsive protein-relatedO.I.H.G.S.X.
0.7389.90.90Zm.9903.1.A1_atBM335103hypothetical protein LOC100273348-3e+0At1g63220C2 domain-containing proteinO.I.H.G.S.X.
0.7188.20.90Zm.2058.1.A1_atBG268299--1e+1At4g32470ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeO.I.H.G.S.X.
0.5775.10.92Zm.9135.1.A1_atBQ538300small GTP-binding protein domain-7e-4At2g30100ubiquitin family proteinO.I.H.G.S.X.
0.4048.50.90Zm.1967.1.A1_atBG836522pathogenesis-related protein 10 /// pathogenesis-related protein 1-1e-23At1g77180chromatin protein familyO.I.H.G.S.X.
0.3336.00.91Zm.11663.1.A1_atCO531620hypothetical protein LOC100273622-2e+0At4g28170unknown proteinO.I.H.G.S.X.
0.2318.60.92Zm.11835.1.A1_atBM381123gastric triacylglycerol lipase-3e+0At1g27890CCR4-NOT transcription complex protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.798.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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