Co-expression analysis

Gene ID Zm.9130.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g62220: serine/threonine protein kinase, putative (HF=7e-2)
Module size 16 genes
NF 0.74
%ile 94.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8796.40.90Zm.9130.1.A1_atBM268570--7e-2At3g62220serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.8796.40.96ZmAffx.535.1.A1_atAI711782--2e-1At1g23270unknown proteinO.I.H.G.S.X.
0.8194.30.95Zm.14226.1.A1_atBM337251hypothetical protein LOC100273457-3e-2At3g20100CYP705A19O.I.H.G.S.X.
0.7792.10.94ZmAffx.637.1.S1_atAI676831--2e+1At4g31355unknown proteinO.I.H.G.S.X.
0.7490.30.95Zm.17308.1.A1_atCF625691--2e+0At1g64350SEH1HO.I.H.G.S.X.
0.7490.30.96Zm.19194.1.A1_atCO519708--1e-11At3g10050OMR1 (L-O-METHYLTHREONINE RESISTANT 1)O.I.H.G.S.X.
0.7389.90.94ZmAffx.920.1.A1_atAI783286--7e-1At5g16650DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.7288.60.93Zm.1422.1.A1_atCA402968hypothetical protein LOC100279513-1e-59At2g45290transketolase, putativeO.I.H.G.S.X.
0.7188.20.96Zm.17308.1.A1_a_atCF625691--2e+0At1g64350SEH1HO.I.H.G.S.X.
0.7087.00.95ZmAffx.183.1.S1_atAI668346--3e+0At5g57510unknown proteinO.I.H.G.S.X.
0.6986.50.95Zm.610.1.A1_atAF326498.1small basic membrane intrinsic protein1b-1e-1At4g16360AMP-activated protein kinaseO.I.H.G.S.X.
0.6986.50.93Zm.6491.1.S1_atCA405051hypothetical protein LOC100194281-1e-17At3g22425IGPDO.I.H.G.S.X.
0.6582.10.95Zm.6612.1.S1_atAI444726hypothetical protein LOC100279969-2e-1At1g64380AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.6381.10.94Zm.16259.3.A1_a_atAI395995hypothetical protein LOC100273269-2e+0At3g20865AGP40 (arabinogalactan-protein 40)O.I.H.G.S.X.
0.6179.50.93ZmAffx.265.1.A1_atAI670393--3e+0At3g45770oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.5674.40.95ZmAffx.1325.1.S1_at40794996-35--4e-2At1g49910WD-40 repeat family protein / mitotic checkpoint protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.799.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.999.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.798.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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