Co-expression analysis

Gene ID Zm.9118.1.A1_at
Gene name hypothetical protein LOC100273366
Homology with ArabidopsisSimilar to At3g25920: RPL15 (HF=2e-6)
Module size 18 genes
NF 0.44
%ile 52.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6179.50.83Zm.9118.1.A1_atBM336433hypothetical protein LOC100273366-2e-6At3g25920RPL15O.I.H.G.S.X.
0.6077.80.91Zm.6394.1.A1_atBM378641hypothetical protein LOC100192557-3e-2At1g52150ATHB-15O.I.H.G.S.X.
0.5875.10.91Zm.6419.1.A1_atCF635415xyloglucan endotransglucosylase/hydrolase-3e-6At5g13870EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)O.I.H.G.S.X.
0.5674.40.90Zm.10621.1.A1_atCF245020carboxyl-terminal proteinase-2e+1At5g18290SIP1O.I.H.G.S.X.
0.5369.10.92Zm.8573.1.S1_a_atBU051013--2e+1At5g01640PRA1.B5 (PRENYLATED RAB ACCEPTOR 1.B5)O.I.H.G.S.X.
0.4759.90.93Zm.4336.1.S1_atCA403908hypothetical protein LOC100274309-4e+0At5g38580-O.I.H.G.S.X.
0.4759.90.92Zm.12612.1.A1_atBU050513--6e-1At1g23260MMZ1 (MMS ZWEI HOMOLOGUE 1)O.I.H.G.S.X.
0.4251.30.92Zm.4793.4.A1_x_atBM340717hypothetical protein LOC100193376-7e-5At3g10860ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.4048.50.93Zm.6381.1.A1_atCO534945hypothetical protein LOC100273528-2e+0At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.H.G.S.X.
0.3844.20.91Zm.6874.2.S1_atCF637577--3e-3At2g45430DNA-binding protein-relatedO.I.H.G.S.X.
0.3844.20.90Zm.4714.1.A1_atAI738144peptide chain release factor 2-3e-14At1g56350peptide chain release factor, putativeO.I.H.G.S.X.
0.3844.20.91Zm.5841.1.A1_atAI491339hypothetical protein LOC100191489-1e-11At5g13640ATPDATO.I.H.G.S.X.
0.3641.30.91Zm.17579.1.S1_atCF024497RING zinc finger protein-like-2e-6At1g69330zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3437.20.93Zm.6872.1.A1_atAI065521--2e+0At1g27920MAP65-8 (MICROTUBULE-ASSOCIATED PROTEIN 65-8)O.I.H.G.S.X.
0.3233.40.93Zm.6503.1.A1_atCK370921--1e-1At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3131.60.91Zm.6505.1.A1_atAI692111SAM domain family protein-2e-1At5g52220-O.I.H.G.S.X.
0.3131.60.90Zm.17269.1.S1_atCF009913small nuclear ribonucleoprotein Sm D2-3e-44At2g47640small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putativeO.I.H.G.S.X.
0.2419.80.90Zm.685.1.S1_atAY029317.1barley mlo defense gene homolog6-4e-3At1g42560MLO9 (MILDEW RESISTANCE LOCUS O 9)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.598.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.190.8GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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