Co-expression analysis

Gene ID Zm.9117.1.A1_at
Gene name hypothetical protein LOC100274722
Homology with ArabidopsisSimilar to At1g71865: unknown protein (HF=4e-1)
Module size 14 genes
NF 0.48
%ile 60.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6279.80.97Zm.9117.1.A1_atCF636944hypothetical protein LOC100274722-4e-1At1g71865unknown proteinO.I.H.G.S.X.
0.5674.40.98Zm.10148.1.A1_atBM382070--3e-1At4g18620-O.I.H.G.S.X.
0.5571.60.98Zm.9335.1.A1_atBM268136hypothetical protein LOC100273605-2e-2At2g40580protein kinase family proteinO.I.H.G.S.X.
0.5469.80.98ZmAffx.188.1.S1_atAI668391Hypothetical protein LOC100216777-3e-6At1g13690ATE1O.I.H.G.S.X.
0.5469.80.98ZmAffx.1199.1.S1_atBE057023--5e-2At3g48610phosphoesterase family proteinO.I.H.G.S.X.
0.5469.80.99ZmAffx.932.1.A1_atAI795506--3e+0At5g22430unknown proteinO.I.H.G.S.X.
0.5267.30.98Zm.10557.1.A1_a_atCK347884hypothetical protein LOC100280344 /// agmatine deiminase-6e-6At5g08170EMB1873 (EMBRYO DEFECTIVE 1873)O.I.H.G.S.X.
0.5267.30.99Zm.6751.1.A1_atBG873976hypothetical protein LOC100274772-4e-5At3g62580-O.I.H.G.S.X.
0.5065.70.98Zm.14497.11.S1_atBQ619270--3e-8At5g59910HTB4O.I.H.G.S.X.
0.4251.30.98Zm.13846.1.S1_atAY103949.1--6e-1At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.4048.50.98Zm.9781.1.S1_atAI621430--4e-1At5g49570AtPNG1 (Arabidopsis thaliana peptide-N-glycanase 1)O.I.H.G.S.X.
0.3538.90.98Zm.17775.1.S1_atCF62760250S ribosomal protein L12-2-5e+0At4g14358-O.I.H.G.S.X.
0.3233.40.98Zm.4022.2.A1_atAY109470.1glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-2e+0At3g06860MFP2 (MULTIFUNCTIONAL PROTEIN 2)O.I.H.G.S.X.
0.3131.60.98ZmAffx.1126.1.A1_atAW313158--3e+0At2g28605-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.197.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
3.995.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
3.394.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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