Co-expression analysis

Gene ID Zm.910.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g45640: SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18) (HF=7e-13)
Module size 6 genes
NF 0.69
%ile 91.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.73Zm.910.1.A1_atCK347167--7e-13At2g45640SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)O.I.H.G.S.X.
0.8094.00.73Zm.7906.1.A1_atBM268263zinc finger homeodomain protein 1-6e-3At3g28917MIF2 (MINI ZINC FINGER 2)O.I.H.G.S.X.
0.6785.80.66Zm.16676.1.A1_atCF650507hypothetical protein LOC100192011-6e+0At5g14690unknown proteinO.I.H.G.S.X.
0.6785.80.73Zm.206.3.S1_x_atY09636.140S ribosomal subunit protein S21-5e-12At3g5389040S ribosomal protein S21 (RPS21B)O.I.H.G.S.X.
0.5369.10.72Zm.818.2.A1_atCO531833Hypothetical protein LOC100216560-1e+1At5g67490unknown proteinO.I.H.G.S.X.
0.4759.90.75Zm.17634.1.A1_atCK367914--9e-1At4g19270unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.598.9GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
6.197.4GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
5.196.8GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM206310Lower pulvinus 60 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
4.095.8GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.795.4GSM206304Upper pulvinus 60 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.494.9GSM206306Lower pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.294.5GSM206307Lower pulvinus 5 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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