Co-expression analysis

Gene ID	Zm.9098.1.A1_a_at
Gene name	Hypothetical protein LOC100192894
Homology with Arabidopsis	Similar to At4g31550: WRKY11 (HF=6e-6)
Module size	6 genes
NF	0.14
%ile	9.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.97	Zm.9098.1.A1_a_at	BM336161	Hypothetical protein LOC100192894	-	6e-6	At4g31550	WRKY11	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.1233.1.S1_at	BQ280193	-	-	4e-8	At5g58470	TAF15b (TBP-ASSOCIATED FACTOR 15b)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.7342.1.A1_at	AF371279.1	legumin1	-	4e+0	At5g23100	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.97	Zm.6127.1.S1_at	AY110233.1	-	-	1e-9	At2g03430	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.97	Zm.5450.1.A1_at	CO521828	hypothetical protein LOC100216592	-	1e-1	At1g08080	ACA7 (ALPHA CARBONIC ANHYDRASE 7)	O.I.	H.G.	S.X.	Please select
0.05	1.9	0.97	Zm.14310.1.S1_at	CO533967	hypothetical protein LOC100273342	-	3e-3	At5g23140	NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.1	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.5	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.7	93.2	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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