Co-expression analysis

Gene ID Zm.9089.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g39340: AHP3 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3) (HF=5e+0)
Module size 7 genes
NF 0.10
%ile 6.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.83Zm.9089.1.A1_atBM332138--5e+0At5g39340AHP3 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 3)O.I.H.G.S.X.
0.6381.10.85Zm.15919.1.S1_atAY105419.1--2e+0At5g25290F-box family proteinO.I.H.G.S.X.
0.147.70.89Zm.19019.1.A1_atBM080703hypothetical protein LOC100276837-2e+0At5g54850unknown proteinO.I.H.G.S.X.
0.136.80.91Zm.4189.1.S1_atBM378985Pyruvate Pi dikinase regulatory protein-5e-2At3g01200AtRP2 (PPDK regulatory protein 2)O.I.H.G.S.X.
0.094.00.91Zm.7058.3.S1_x_atAY103767.1ypt homolog2-4e-76At5g47200ATRAB1AO.I.H.G.S.X.
0.041.50.90Zm.7663.1.A1_atBQ486953--2e+0At4g30230unknown proteinO.I.H.G.S.X.
0.031.10.88Zm.13870.2.S1_s_atAF099435.1R2R3MYB-domain protein-2e-5At5g40330MYB23 (MYB DOMAIN PROTEIN 23)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.398.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
7.097.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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