Co-expression analysis

Gene ID Zm.9060.1.A1_at
Gene name hypothetical protein LOC100274301
Homology with ArabidopsisSimilar to At5g57370: unknown protein (HF=1e+0)
Module size 21 genes
NF 0.38
%ile 41.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7288.60.97Zm.9060.1.A1_atCO523385hypothetical protein LOC100274301-1e+0At5g57370unknown proteinO.I.H.G.S.X.
0.5875.10.98Zm.8600.1.S1_atAY107085.1--6e-2At5g52200unknown proteinO.I.H.G.S.X.
0.5166.40.98Zm.4774.1.A1_atCF637265hypothetical protein LOC100191958-1e+0At3g26360unknown proteinO.I.H.G.S.X.
0.4961.90.99Zm.5115.1.A1_atAI600917hypothetical protein LOC100272658-2e-46At3g20290ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)O.I.H.G.S.X.
0.4759.90.98Zm.17656.1.S1_atCK369512--5e+0At4g08151unknown proteinO.I.H.G.S.X.
0.4759.90.99Zm.5230.1.A1_atCA404914acyl-desaturase-2e-17At2g43710SSI2O.I.H.G.S.X.
0.4455.70.98Zm.8612.1.A1_atBM074907hypothetical protein LOC100278970-6e+0At3g27380SDH2-1O.I.H.G.S.X.
0.4455.70.99Zm.1134.1.A1_atAY112160.1hypothetical protein LOC100193278-3e+0At2g26940zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4455.70.98Zm.8846.1.A1_atBM337343--4e+0At3g29250copper ion binding / oxidoreductaseO.I.H.G.S.X.
0.4251.30.99Zm.11338.1.A1_atBM349130hypothetical protein LOC100274516-3e-6At2g40190glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.4048.50.99Zm.2012.1.S1_atAW566063--8e+0At5g23220NIC3 (NICOTINAMIDASE 3)O.I.H.G.S.X.
0.3945.60.98Zm.9213.1.A1_atBM267362hypothetical protein LOC100278667-5e+0At5g45590unknown proteinO.I.H.G.S.X.
0.3538.90.98Zm.8639.1.A1_atBM332170--2e+1At5g58600PMR5 (POWDERY MILDEW RESISTANT 5)O.I.H.G.S.X.
0.3437.20.99Zm.18038.1.S1_atCD219308--2e+1At5g66700HB53O.I.H.G.S.X.
0.3233.40.98Zm.5070.1.A1_atAY108736.1hypothetical protein LOC100193023-2e-16At1g22950iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsO.I.H.G.S.X.
0.2928.10.99Zm.583.1.S1_atAF305892.1tangled1-3e-1At1g21350antioxidant/ oxidoreductaseO.I.H.G.S.X.
0.2622.70.99Zm.13196.1.S1_atAY105985.1t-snare-6e-2At5g59210myosin heavy chain-relatedO.I.H.G.S.X.
0.2216.90.99Zm.7309.1.S1_atAF384036.1nucleosome/chromatin assembly factor A-2e-3At1g18800NRP2 (NAP1-RELATED PROTEIN 2)O.I.H.G.S.X.
0.2115.50.98Zm.3783.1.S1_atAW331211Betaine aldehyde dehydrogenase-6e-4At3g48170ALDH10A9O.I.H.G.S.X.
0.2115.50.98ZmAffx.1134.1.S1_atAW331087--8e-1At4g10270wound-responsive family proteinO.I.H.G.S.X.
0.2014.20.99Zm.6411.1.A1_atBE519338Hypothetical protein LOC100193027-7e-3At1g23900GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM253244ZM_12h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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