Co-expression analysis

Gene ID	Zm.899.1.A1_at
Gene name	esterase
Homology with Arabidopsis	Similar to At1g29840: esterase/lipase/thioesterase family protein (HF=6e-7)
Module size	6 genes
NF	0.39
%ile	42.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	0.95	Zm.899.1.A1_at	CK370176	esterase	-	6e-7	At1g29840	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.96	Zm.14784.1.S1_at	AI795527	-	-	3e+0	At3g01175	-	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.18556.1.S1_at	CO049296	versicolorin reductase	-	3e+0	At1g11230	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	ZmAffx.1198.1.S1_at	BE056195	-	-	2e-1	At1g75040	PR5 (PATHOGENESIS-RELATED GENE 5)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.96	Zm.4602.1.A1_at	AI737296	-	-	1e-1	At3g01280	VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.96	Zm.18085.1.S1_at	CK986038	hypothetical protein LOC100274126	-	5e-11	At5g13800	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.5	97.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.85428.1.S1_at, orthologous to the query gene, Zm.899.1.A1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.85	93.8	TaAffx.85428.1.S1_at	At1g29840	-	-	4e+0	At5g42000	ORMDL family protein	O.I.	H.G.	S.X.	Please select
0.69	86.9	TaAffx.78855.1.S1_at	At1g29840	-	-	5e-2	At1g49930	-	O.I.	H.G.	S.X.	Please select
0.63	83.1	TaAffx.58994.1.S1_at	At1g29840	-	-	4e+0	At3g52510	-	O.I.	H.G.	S.X.	Please select
0.58	79.2	TaAffx.119601.1.S1_at	At1g29840	-	-	9e+0	At5g59950	RNA and export factor-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.57	79.2	Ta.3501.3.A1_at	At1g29840	-	-	3e-1	At5g08330	TCP family transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.55	76.8	TaAffx.85343.1.S1_at	At1g29840	-	-	4e+0	At5g34828	-	O.I.	H.G.	S.X.	Please select
0.54	75.5	Ta.16516.1.S1_at	At1g29840	-	-	9e-1	At5g35475	-	O.I.	H.G.	S.X.	Please select
0.53	74.9	TaAffx.35493.1.S1_at	At1g29840	-	-	4e+0	At5g07460	PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.53	74.9	TaAffx.117156.3.S1_at	At1g29840	-	-	9e-1	At5g48575	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	TaAffx.79437.1.S1_at	At1g29840	-	-	3e+0	At1g02680	TAF13 (TBP-ASSOCIATED FACTOR 13)	O.I.	H.G.	S.X.	Please select
0.52	73.7	TaAffx.12517.1.S1_at	At1g29840	-	-	1e+0	At5g34581	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	TaAffx.50210.1.S1_at	At1g29840	-	-	7e-2	At1g60880	AGL56	O.I.	H.G.	S.X.	Please select
0.51	73.0	TaAffx.66590.1.A1_at	At1g29840	-	-	1e+1	At4g21440	ATMYB102 (ARABIDOPSIS MYB-LIKE 102)	O.I.	H.G.	S.X.	Please select
0.49	69.7	TaAffx.24121.1.S1_at	At1g29840	-	-	2e-1	At1g11590	pectin methylesterase, putative	O.I.	H.G.	S.X.	Please select
0.48	69.0	TaAffx.82014.1.S1_at	At1g29840	-	-	1e+0	At1g45063	copper ion binding / electron carrier	O.I.	H.G.	S.X.	Please select
0.44	64.5	TaAffx.80426.1.S1_at	At1g29840	-	-	4e-1	At2g12935	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	TaAffx.4913.1.S1_at	At1g29840	-	-	2e+1	At5g67060	HEC1 (HECATE 1)	O.I.	H.G.	S.X.	Please select
0.43	62.2	TaAffx.25008.1.S1_at	At1g29840	-	-	1e+1	At5g24370	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.41	59.6	TaAffx.109025.3.S1_at	At1g29840	-	-	2e-1	At1g08790	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	TaAffx.5596.1.S1_at	At1g29840	-	-	3e+0	At1g12250	thylakoid lumenal protein-related	O.I.	H.G.	S.X.	Please select
0.40	58.4	TaAffx.55653.1.S1_at	At1g29840	-	-	1e+1	At4g20030	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	TaAffx.31212.1.S1_at	At1g29840	-	-	7e+0	At5g20820	auxin-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.38	54.7	TaAffx.31791.1.S1_at	At1g29840	-	-	7e-1	At5g26717	-	O.I.	H.G.	S.X.	Please select
0.38	54.7	Ta.8956.1.A1_at	At1g29840	-	-	3e+0	At3g31350	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	Ta.3911.2.S1_s_at	At1g29840	-	-	4e+0	At2g44290	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)	O.I.	H.G.	S.X.	Please select
0.38	54.7	Ta.16180.1.A1_at	At1g29840	-	-	1e+0	At1g03410	2A6	O.I.	H.G.	S.X.	Please select
0.35	49.8	TaAffx.79010.1.S1_at	At1g29840	-	-	3e+0	At4g31470	pathogenesis-related protein, putative	O.I.	H.G.	S.X.	Please select
0.35	49.8	TaAffx.58638.1.S1_at	At1g29840	-	-	4e+0	At1g12805	nucleotide binding	O.I.	H.G.	S.X.	Please select
0.34	48.1	TaAffx.3664.1.S1_at	At1g29840	-	-	2e+0	At2g47710	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	TaAffx.51594.1.S1_at	At1g29840	-	-	1e+0	At3g51810	EM1 (LATE EMBRYOGENESIS ABUNDANT 1)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

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