Co-expression analysis

Gene ID	Zm.899.1.A1_at
Gene name	esterase
Homology with Arabidopsis	Similar to At1g29840: esterase/lipase/thioesterase family protein (HF=6e-7)
Module size	6 genes
NF	0.39
%ile	42.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	0.95	Zm.899.1.A1_at	CK370176	esterase	-	6e-7	At1g29840	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.96	Zm.14784.1.S1_at	AI795527	-	-	3e+0	At3g01175	-	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.18556.1.S1_at	CO049296	versicolorin reductase	-	3e+0	At1g11230	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	ZmAffx.1198.1.S1_at	BE056195	-	-	2e-1	At1g75040	PR5 (PATHOGENESIS-RELATED GENE 5)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.96	Zm.4602.1.A1_at	AI737296	-	-	1e-1	At3g01280	VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.96	Zm.18085.1.S1_at	CK986038	hypothetical protein LOC100274126	-	5e-11	At5g13800	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.5	97.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.53488.1.S1_at, orthologous to the query gene, Zm.899.1.A1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	57.1	GmaAffx.53488.1.S1_at	At1g29840	-	-	2e-1	At5g23260	TT16 (TRANSPARENT TESTA16)	O.I.	H.G.	S.X.	Please select
0.30	40.4	GmaAffx.48291.1.S1_at	At1g29840	-	-	1e-9	At4g17360	formyltetrahydrofolate deformylase/ hydroxymethyl-, formyl- and related transferase/ methyltransferase	O.I.	H.G.	S.X.	Please select
0.25	32.6	GmaAffx.84878.1.S1_at	At1g29840	-	-	3e-2	At2g43180	catalytic	O.I.	H.G.	S.X.	Please select
0.22	28.1	GmaAffx.78801.1.S1_at	At1g29840	-	-	5e-6	At1g74640	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	26.6	GmaAffx.18985.1.S1_at	At1g29840	-	-	3e-7	At3g47560	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.05	8.0	GmaAffx.42874.1.S1_at	At1g29840	-	-	7e-14	At2g35840	sucrose-phosphatase 1 (SPP1)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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