Co-expression analysis

Gene ID	Zm.8945.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g18580: FASS (FASS 1) (HF=2e-85)
Module size	6 genes
NF	0.48
%ile	59.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.97	Zm.8945.1.S1_at	AY103889.1	-	-	2e-85	At5g18580	FASS (FASS 1)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.16593.10.A1_a_at	AI714631	-	-	8e-7	At3g05230	signal peptidase subunit family protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.98	Zm.890.2.A1_a_at	CA400673	GSDL-motif lipase	-	5e+0	At5g55710	-	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.98	Zm.6681.1.A1_at	BG837073	wound induced protein	-	3e-1	At4g28240	wound-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.98	Zm.5950.1.A1_at	BG837473	hypothetical protein LOC100216987	-	9e-3	At3g56480	myosin heavy chain-related	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.98	Zm.6146.1.A1_at	CD989568	brassinosteroid biosynthesis-like protein	-	1e-40	At3g19820	DWF1 (DWARF 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.0	98.9	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
10.0	98.4	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.2	97.8	GSM162265	Wild type 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
5.6	97.1	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.7	95.4	GSM206325	Upper pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.5	95.1	GSM202311	Mo17xB73 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.4	94.9	GSM202309	Mo17 19 day after pollination embryo tissue, biological replicate 1	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.2	94.5	GSM206301	Upper pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.2	94.5	GSM202322	B73x Mo17 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
3.1	94.3	GSM202324	Mo17xB73 19 day after pollination embryo tissue, biological replicate 3	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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