Co-expression analysis

Gene ID Zm.8929.1.A1_a_at
Gene name hypothetical protein LOC100277218
Homology with ArabidopsisSimilar to At4g02489: unknown protein (HF=5e+0)
Module size 7 genes
NF 0.26
%ile 21.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7590.80.95Zm.8929.1.A1_a_atAW352606hypothetical protein LOC100277218-5e+0At4g02489unknown proteinO.I.H.G.S.X.
0.5369.10.96Zm.15340.1.A1_a_atCO523062--3e+0At3g61630CRF6 (CYTOKININ RESPONSE FACTOR 6)O.I.H.G.S.X.
0.2928.10.97Zm.13720.1.S1_s_atAY106348.1MPK17-2 - putative MAPK-1e-18At3g18040MPK9 (MAP KINASE 9)O.I.H.G.S.X.
0.2419.80.97Zm.3551.1.A1_atAY105376.1--5e-18At1g48490kinaseO.I.H.G.S.X.
0.2216.90.97Zm.17985.1.A1_atCK827203--7e-44At5g63680pyruvate kinase, putativeO.I.H.G.S.X.
0.1710.60.97Zm.6532.6.A1_atCK370644hypothetical protein LOC100272908 /// abscisic stress ripening protein 2 /// abscisic stress ripening protein 2-1e-1At1g62060unknown proteinO.I.H.G.S.X.
0.104.60.97Zm.8900.1.A1_atCK827399hypothetical protein LOC100272787-2e-13At1g11750CLPP6O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.598.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.090.2GSM253249ZM_12h_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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