Co-expression analysis

Gene ID	Zm.8926.2.S1_at
Gene name	Hypothetical protein LOC100192920
Homology with Arabidopsis	Similar to At4g15150: glycine-rich protein (HF=3e-1)
Module size	12 genes
NF	0.43
%ile	50.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.65	82.1	0.95	Zm.8926.2.S1_at	BM350553	Hypothetical protein LOC100192920	-	3e-1	At4g15150	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.70	87.0	0.96	Zm.17174.1.A1_at	CO531239	hypothetical protein LOC100273979	-	2e-6	At1g24400	LHT2 (LYSINE HISTIDINE TRANSPORTER 2)	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.96	Zm.17443.1.A1_at	CK347379	-	-	5e+0	At4g14100	transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.5012.1.A1_at	CK849978	auxin response factor 75	-	9e-1	At3g45050	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.97	Zm.3714.1.A1_at	BQ779267	eukaryotic translation initiation factor 3 subunit 3	-	2e-32	At1g10840	TIF3H1	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.97	Zm.14429.4.A1_at	CK827265	RALF	-	6e+0	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.98	Zm.17923.1.A1_at	AY110526.1	hypothetical protein LOC100276264	-	1e-1	At2g44840	ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.98	Zm.17320.1.A1_at	CK348081	hypothetical protein LOC100277232	-	5e-3	At5g64905	PROPEP3 (Elicitor peptide 3 precursor)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.97	Zm.2792.1.S1_at	CD998237	hypothetical protein LOC100276061	-	8e-10	At5g59960	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.97	Zm.15215.1.A1_at	BM332652	Hypothetical protein LOC100193843	-	1e+0	At5g22870	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.97	Zm.3729.1.A1_at	BE510951	hypothetical protein LOC100194194	-	6e-1	At4g09260	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.96	Zm.8789.1.A1_at	CK347665	hypothetical protein LOC100192110	-	1e-1	At2g33510	protein binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.1	99.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.8	99.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.3	99.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.4	99.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.3	99.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.7	99.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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