Co-expression analysis

Gene ID	Zm.8921.1.A1_at
Gene name	hypothetical protein LOC100217070
Homology with Arabidopsis	Similar to At1g73060: unknown protein (HF=7e-22)
Module size	7 genes
NF	0.09
%ile	5.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	99.2	0.90	Zm.8921.1.A1_at	BM075327	hypothetical protein LOC100217070	-	7e-22	At1g73060	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.95	Zm.13885.1.S1_s_at	AF099413.1	MYB59 /// R2R3MYB-domain protein /// R2R3MYB-domain protein	-	2e-1	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.96	Zm.13885.1.A1_s_at	AF099413.1	R2R3MYB-domain protein	-	2e-1	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.96	Zm.19167.1.A1_at	AI629472	hypothetical protein LOC100194096	-	1e-17	At4g10000	electron carrier/ protein disulfide oxidoreductase	O.I.	H.G.	S.X.	Please select
0.06	2.3	0.96	Zm.18496.1.S1_at	CO519895	hypothetical protein LOC100217235	-	2e-1	At5g05100	nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.05	1.9	0.96	Zm.11238.1.A1_at	BM340814	-	-	5e-3	At5g39100	GLP6 (GERMIN-LIKE PROTEIN 6)	O.I.	H.G.	S.X.	Please select
0.03	1.1	0.91	Zm.3796.1.A1_at	BG836961	Hypothetical protein LOC100192039	-	8e-1	At2g32765	SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.2	99.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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