Co-expression analysis

Gene ID Zm.8915.2.S1_a_at
Gene name UDP-sugar pyrophospharylase
Homology with ArabidopsisSimilar to Atmg00370: - (HF=3e-1)
Module size 34 genes
NF 0.49
%ile 63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8996.80.80Zm.8915.2.S1_a_atCD526531UDP-sugar pyrophospharylase-3e-1Atmg00370-O.I.H.G.S.X.
0.8094.00.85Zm.16502.4.A1_atCK986103hypothetical protein LOC100277865 /// hypothetical protein LOC100280121-1e-1At1g51080unknown proteinO.I.H.G.S.X.
0.7691.10.91Zm.3966.1.A1_atAI795713--5e-2At1g563103'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.7389.90.88Zm.2856.1.A1_atAW076433BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-9e-34At2g35620FEI2 (FEI 2)O.I.H.G.S.X.
0.7188.20.86ZmAffx.27.1.A1_atAI622299Hypothetical protein LOC100191746-3e+0At5g46350WRKY8O.I.H.G.S.X.
0.6986.50.89Zm.18251.1.A1_atCN845321--5e-3At5g66080protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.6785.80.89Zm.704.1.S1_atU15781.1xyloglucan endotransglycosylase homolog1-3e-6At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)O.I.H.G.S.X.
0.6682.30.84ZmAffx.684.1.A1_atAI734818transferase family protein-1e+1At5g40620unknown proteinO.I.H.G.S.X.
0.6582.10.89Zm.5048.9.S1_atAI600956hypothetical protein LOC100191158-1e-5At5g45410unknown proteinO.I.H.G.S.X.
0.6381.10.84ZmAffx.29.1.A1_atAI657322--2e-1At1g65445transferase-relatedO.I.H.G.S.X.
0.6381.10.92Zm.11965.1.A1_atBM382230hypothetical protein LOC100275559-2e+0At1g06070bZIP transcription factor, putative (bZIP69)O.I.H.G.S.X.
0.6077.80.89Zm.34.2.A1_atAY103769.1nuclear cap-binding protein subunit 2-1e-13At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.
0.5775.10.90Zm.19194.1.A1_atCO519708--1e-11At3g10050OMR1 (L-O-METHYLTHREONINE RESISTANT 1)O.I.H.G.S.X.
0.5469.80.88Zm.16892.3.S1_a_atCB281906calmodulin binding protein-5e-3At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.5166.40.86Zm.10391.1.S1_atBQ279485--2e+0At3g22840ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN)O.I.H.G.S.X.
0.5166.40.86ZmAffx.332.1.A1_atAI670515--3e+0At3g27920ATMYB0 (MYB DOMAIN PROTEIN 0)O.I.H.G.S.X.
0.4861.30.86Zm.4770.1.A1_atAI739936--3e-1At5g49550unknown proteinO.I.H.G.S.X.
0.4759.90.90Zm.2165.1.A1_atBM072875hypothetical protein LOC100278701-6e+0At5g25390SHN2 (shine2)O.I.H.G.S.X.
0.4658.40.84Zm.16502.3.S1_atCA404880hypothetical protein LOC100193012-1e-7At5g08180ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinO.I.H.G.S.X.
0.4658.40.90Zm.6491.1.S1_atCA405051hypothetical protein LOC100194281-1e-17At3g22425IGPDO.I.H.G.S.X.
0.4556.40.91RPTR-Zm-J01347-2_atRPTR-Zm-J01347-2---O.I.H.G.S.X.
0.4352.80.92Zm.17308.1.A1_a_atCF625691--2e+0At1g64350SEH1HO.I.H.G.S.X.
0.4352.80.89ZmAffx.782.1.S1_atAI759014--8e-1At2g46455-O.I.H.G.S.X.
0.4149.70.92Zm.17308.1.A1_atCF625691--2e+0At1g64350SEH1HO.I.H.G.S.X.
0.4149.70.86Zm.15807.1.A1_atAY111212.1--1e+0At4g19590DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.4048.50.90RPTR-Zm-J01347-1_atRPTR-Zm-J01347-1---O.I.H.G.S.X.
0.3844.20.88Zm.11654.1.A1_atCK347373hypothetical protein LOC100280135-1e-5At3g54420ATEP3O.I.H.G.S.X.
0.3437.20.96Zm.6612.1.S1_atAI444726hypothetical protein LOC100279969-2e-1At1g64380AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.3336.00.91ZmAffx.535.1.A1_atAI711782--2e-1At1g23270unknown proteinO.I.H.G.S.X.
0.3336.00.88RPTR-Zm-J01347-1_s_atRPTR-Zm-J01347-1---O.I.H.G.S.X.
0.3336.00.86RPTR-Zm-ECOLOXL_x_atRPTR-Zm-ECOLOXL---O.I.H.G.S.X.
0.3233.40.91RPTR-Zm-ECOLOXB_x_atRPTR-Zm-ECOLOXB---O.I.H.G.S.X.
0.3233.40.87RPTR-Zm-J01347-3_atRPTR-Zm-J01347-3---O.I.H.G.S.X.
0.2622.70.85Zm.12244.2.S1_atAI668243--9e-1At5g46940invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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