| Gene ID | Zm.8911.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g23540: 26S proteasome regulatory subunit, putative (HF=4e-2) |
| Module size | 6 genes |
| NF | 0.47 |
| %ile | 59.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.56 | 74.4 | 0.98 | Zm.8911.1.A1_at | BM350783 | - | - | 4e-2 | At5g23540 | 26S proteasome regulatory subunit, putative | O.I. | H.G. | S.X. | |
| 0.80 | 94.0 | 0.98 | Zm.9361.1.A1_at | BM349541 | - | - | 5e+0 | At4g09580 | - | O.I. | H.G. | S.X. | |
| 0.60 | 77.8 | 0.98 | Zm.10375.1.S1_at | BQ703821 | - | - | 2e-17 | At2g35360 | ubiquitin family protein | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.98 | ZmAffx.1193.1.S1_at | BE025345 | - | - | 3e+0 | At3g13140 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. | |
| 0.35 | 38.9 | 0.98 | Zm.13252.1.S1_at | U50816.1 | - | - | 6e-1 | At4g34730 | ribosome-binding factor A family protein | O.I. | H.G. | S.X. | |
| 0.29 | 28.1 | 0.98 | Zm.2269.1.S1_at | CF631922 | - | - | 1e-7 | At5g51820 | PGM (PHOSPHOGLUCOMUTASE) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.8 | 97.9 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.6 | 97.9 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.6 | 97.9 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.5 | 97.8 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.5 | 97.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.9 | 97.7 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.8 | 97.6 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.1 | 97.4 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.6 | 97.1 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.0 | 90.2 | GSM385709 | Deep-sowing 10d treatment TIBA, biological rep1 | GSE15371 | Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.71 | 89.6 | Os01g0267200 | At5g23540 | - | 26S proteasome non-ATPase regulatory subunit 14(26S proteasome regulatory subunit rpn11) | 3e-64 | At5g23540 | 26S proteasome regulatory subunit, putative | O.I. | H.G. | S.X. | |
| 0.82 | 95.0 | Os03g0180400 | At5g23540 | - | Proteasome subunit alpha type 6 (EC 3.4.25.1) (20Sproteasome alpha subunit A) (20S proteasome subunitalpha-1) | 4e-20 | At5g35590 | PAA1 (PROTEASOME ALPHA SUBUNIT A 1) | O.I. | H.G. | S.X. | |
| 0.71 | 89.6 | Os03g0695600 | At5g23540 | - | Proteasome subunit beta type 2 (EC 3.4.25.1) (20Sproteasome alpha subunit D) (20S proteasome subunitbeta-4) | 3e-3 | At3g22630 | PBD1 (20S PROTEASOME BETA SUBUNIT D1) | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os02g0770000 | At5g23540 | - | Beta 1 subunit of 20S proteasome | 6e-13 | At4g31300 | PBA1 | O.I. | H.G. | S.X. | |
| 0.59 | 78.0 | Os07g0691800 | At5g23540 | - | 26S proteasome subunit 4-like protein (26Sproteasome subunit AtRPT2a) | 7e-100 | At2g20140 | 26S protease regulatory complex subunit 4, putative | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os09g0505600 | At5g23540 | - | Proteasome subunit beta type 1 (EC 3.4.25.1) (20Sproteasome alpha subunit F) (20S proteasome subunitbeta-6) | 2e-4 | At3g60820 | PBF1 | O.I. | H.G. | S.X. | |
| 0.53 | 71.3 | Os02g0133800 | At5g23540 | - | 20S proteasome alpha 6 subunit | 4e-5 | At1g47250 | PAF2 | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os06g0192600 | At5g23540 | - | 26S protease regulatory subunit 7 (26S proteasomesubunit 7) (26S proteasome AAA-ATPase subunit RPT1)(Regulatory particle triple-A ATPase subunit 1) | 9e-180 | At1g53750 | RPT1A (REGULATORY PARTICLE TRIPLE-A 1A) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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