Co-expression analysis

Gene ID Zm.8879.1.A1_at
Gene name nudix hydrolase 13
Homology with ArabidopsisSimilar to At3g12600: atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16) (HF=3e-9)
Module size 6 genes
NF 0.56
%ile 74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.97Zm.8879.1.A1_atBM334135nudix hydrolase 13-3e-9At3g12600atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)O.I.H.G.S.X.
0.6785.80.98Zm.12246.1.A1_atBM379517growth inhibition and differentiation-related protein 88-4e-2At5g22120unknown proteinO.I.H.G.S.X.
0.6077.80.98Zm.6512.1.S1_atBG266026--1e+0At3g48840nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.5065.70.98Zm.9830.2.A1_a_atBM341631hypothetical protein LOC100193377-7e-2At2g20613unknown proteinO.I.H.G.S.X.
0.4251.30.97Zm.9183.1.A1_atBM331963--7e-2At1g77810galactosyltransferase family proteinO.I.H.G.S.X.
0.2724.60.98Zm.17923.1.A1_atAY110526.1hypothetical protein LOC100276264-1e-1At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.998.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM205425B73 19 DAP endosperm tissue biological replicate 2GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO
3.394.7GSM205370B73 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
3.394.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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