Co-expression analysis

Gene ID Zm.8864.1.A1_s_at
Gene name hypothetical protein LOC100278083
Homology with ArabidopsisSimilar to At4g13720: inosine triphosphate pyrophosphatase, putative / HAM1 family protein (HF=6e+0)
Module size 10 genes
NF 0.12
%ile 7.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.94Zm.8864.1.A1_s_atBM269430hypothetical protein LOC100278083-6e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.4658.40.95Zm.16498.1.S1_a_atAY103577.1hypothetical protein LOC100193260-1e-109At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.2724.60.97Zm.13856.1.S1_atAF439727.1formate tetrahyrofolate ligase-9e-58At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)O.I.H.G.S.X.
0.2216.90.96Zm.19355.1.A1_atBG549786STIP1 homology and U box-containing protein 1-2e+0At3g14820carboxylesterase/ hydrolase, acting on ester bonds / lipaseO.I.H.G.S.X.
0.1811.60.97Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinO.I.H.G.S.X.
0.1710.60.97Zm.17366.1.S1_s_atCK371241--1e+1At5g20060phospholipase/carboxylesterase family proteinO.I.H.G.S.X.
0.125.90.96Zm.7671.1.A1_atBM073122hypothetical protein LOC100272470-8e-2At4g00232unknown proteinO.I.H.G.S.X.
0.104.60.95Zm.1480.1.A1_atCA403094--1e+0At1g28330DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)O.I.H.G.S.X.
0.062.30.95Zm.5095.1.S1_s_atBM269118hypothetical protein LOC100192930-2e+0At4g16447unknown proteinO.I.H.G.S.X.
0.041.50.95Zm.18353.1.A1_atAY111403.1hypothetical protein LOC100280196-2e+0At1g16640transcriptional factor B3 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.298.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
7.897.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
6.497.5GSM206313Upper pulvinus 5 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
5.497.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM202292B73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
5.296.9GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os08g0475500, orthologous to the query gene, Zm.8864.1.A1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.98100.0Os08g0475500At4g13720-Conserved hypothetical protein6e-1At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.7289.8Os06g0551900At4g13720--5e-1At1g48610AT hook motif-containing proteinO.I.H.G.S.X.
0.7189.6Os11g0215700At4g13720--6e-2At5g17650glycine/proline-rich proteinO.I.H.G.S.X.
0.6281.5Os10g0350000At4g13720--2e+0At3g13850LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)O.I.H.G.S.X.
0.6181.2Os04g0366301At4g13720--9e-1At5g49350unknown proteinO.I.H.G.S.X.
0.5877.0Os08g0259250At4g13720--1e+0At5g26114unknown proteinO.I.H.G.S.X.
0.5777.0Os04g0124200At4g13720--1e+1At5g49800-O.I.H.G.S.X.
0.5676.3Os11g0164400At4g13720--7e-1At1g75550glycine-rich proteinO.I.H.G.S.X.
0.5573.7Os11g0531100At4g13720--5e+0At4g25140OLEO1 (OLEOSIN 1)O.I.H.G.S.X.
0.5573.7Os07g0138800At4g13720--9e-2At2g18120SRS4 (SHI-RELATED SEQUENCE 4)O.I.H.G.S.X.
0.5371.3Os02g0772700At4g13720--3e-1At1g32290unknown proteinO.I.H.G.S.X.
0.5168.7Os08g0432300At4g13720--2e+0At1g13380unknown proteinO.I.H.G.S.X.
0.5068.0Os05g0343100At4g13720--1e+0At4g39360unknown proteinO.I.H.G.S.X.
0.4964.4Os03g0622400At4g13720-Conserved hypothetical protein4e+0At5g05370ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeO.I.H.G.S.X.
0.4863.7Os03g0256500At4g13720-Conserved hypothetical protein9e+0Atmg01060-O.I.H.G.S.X.
0.4863.7Os05g0439750At4g13720--1e-2At2g41380embryo-abundant protein-relatedO.I.H.G.S.X.
0.4458.1Os04g0547500At4g13720--5e-4At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)O.I.H.G.S.X.
0.4355.4Os01g0829700At4g13720-Conserved hypothetical protein2e-1At1g03700-O.I.H.G.S.X.
0.4253.9Os08g0295201At4g13720--3e+0At1g24577unknown proteinO.I.H.G.S.X.
0.4152.4Os03g0749400At4g13720-Conserved hypothetical protein9e-1At2g15580zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4152.4Os01g0536500At4g13720-Conserved hypothetical protein6e-1At1g07680unknown proteinO.I.H.G.S.X.
0.4051.1Os04g0134700At4g13720--1e+1At5g58500LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)O.I.H.G.S.X.
0.4051.1Os07g0517900At4g13720-Cytochrome P450 family protein3e+0At2g47490mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.4051.1Os01g0944150At4g13720--7e-103Atmg00520-O.I.H.G.S.X.
0.4051.1Os10g0327400At4g13720--2e+0At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.4051.1Os07g0456000At4g13720--1e+0At4g271502S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2O.I.H.G.S.X.
0.3846.9Os09g0502700At4g13720--4e+0At4g27280calcium-binding EF hand family proteinO.I.H.G.S.X.
0.3440.0Os09g0481650At4g13720--3e-1At1g44830AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.3338.8Os06g0528000At4g13720--1e+0At5g52570BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)O.I.H.G.S.X.
0.3338.8Os07g0245801At4g13720--3e-1At1g48770unknown proteinO.I.H.G.S.X.
0.3338.8Os09g0259366At4g13720--6e+0At5g60400unknown proteinO.I.H.G.S.X.
0.3236.3Os02g0303800At4g13720--7e-1At1g79430APL (ALTERED PHLOEM DEVELOPMENT)O.I.H.G.S.X.
0.3236.3Os02g0449875At4g13720--4e+0At4g17215unknown proteinO.I.H.G.S.X.
0.3134.5Os12g0253800At4g13720--9e-1At1g56020unknown proteinO.I.H.G.S.X.
0.3032.7Os08g0244600At4g13720--1e+0At2g05380GRP3S (GLYCINE-RICH PROTEIN 3 SHORT ISOFORM)O.I.H.G.S.X.
0.2931.1Os02g0159250At4g13720--7e+0At5g24316proline-rich family proteinO.I.H.G.S.X.
0.2931.1Os09g0133300At4g13720--7e-1At3g62760ATGSTF13O.I.H.G.S.X.
0.2831.1Os02g0740800At4g13720-Hypothetical protein2e-4At1g24130transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2727.5Os10g0550600At4g13720--1e+0At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.
0.2625.6Os03g0122100At4g13720--3e-2At1g0110060S acidic ribosomal protein P1 (RPP1A)O.I.H.G.S.X.
0.2625.6Os06g0275750At4g13720--1e-1At2g27580zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.2524.1Os01g0272700At4g13720--1e+0At5g27440unknown proteinO.I.H.G.S.X.
0.2524.1Os02g0104300At4g13720--2e+0At5g10430AGP4 (ARABINOGALACTAN PROTEIN 4)O.I.H.G.S.X.
0.2524.1Os06g0521200At4g13720-Haem peroxidase, plant/fungal/bacterial familyprotein1e-4At3g50990electron carrier/ heme binding / peroxidaseO.I.H.G.S.X.
0.2524.1Os09g0562150At4g13720--1e-1At5g595302-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.2321.2Os03g0566900At4g13720--1e+0At3g11600unknown proteinO.I.H.G.S.X.
0.2016.5Os07g0646901At4g13720--3e+0At4g19270unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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