Co-expression analysis

Gene ID Zm.8822.2.A1_at
Gene name xylanase inhibitor protein 1
Homology with ArabidopsisSimilar to At5g56480: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=6e+0)
Module size 16 genes
NF 0.49
%ile 61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.00.99Zm.8822.2.A1_atBM331999xylanase inhibitor protein 1-6e+0At5g56480protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.6785.80.99ZmAffx.871.1.A1_atAI770769--8e-1At1g69760unknown proteinO.I.H.G.S.X.
0.6582.10.99Zm.2868.1.A1_atCO521622--1e+0At3g28560-O.I.H.G.S.X.
0.5775.10.99Zm.1628.2.A1_atAW787801--3e-1At1g08465YAB2 (YABBY2)O.I.H.G.S.X.
0.5369.10.99Zm.17260.1.A1_atCK145375hypothetical protein LOC100277879-1e+0At2g38730peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeO.I.H.G.S.X.
0.5065.70.99Zm.2402.1.A1_atCO524786transformer-2 protein-9e+0At3g06490MYB108 (myb domain protein 108)O.I.H.G.S.X.
0.5065.71.00Zm.3610.1.A1_atAW065778hypothetical protein LOC100276901-2e+0At4g04360unknown proteinO.I.H.G.S.X.
0.4861.30.99Zm.6234.2.S1_atAI881460--8e-7At2g30110ATUBA1O.I.H.G.S.X.
0.4861.30.99ZmAffx.1187.1.S1_atBE012211--3e+0At4g29033-O.I.H.G.S.X.
0.4251.30.99ZmAffx.1173.1.S1_atAW787668--3e+0At3g47800aldose 1-epimerase family proteinO.I.H.G.S.X.
0.4251.30.99ZmAffx.982.4.S1_atAW787457--3e+0At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)O.I.H.G.S.X.
0.4149.70.99Zm.3608.1.A1_atBG842128protein lap1-6e-4At3g11330leucine-rich repeat family proteinO.I.H.G.S.X.
0.3641.30.99Zm.361.1.A1_atAB060130.1response regulator 8-5e-3At3g16857ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1)O.I.H.G.S.X.
0.3437.20.99Zm.9636.1.A1_atBM349325--2e+1At5g6751060S ribosomal protein L26 (RPL26B)O.I.H.G.S.X.
0.2622.70.99Zm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.2115.51.00Zm.14302.1.A1_atBG841920proteasome subunit alpha type 3-9e-28At2g27020PAG1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.498.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM206307Lower pulvinus 5 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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