Co-expression analysis

Gene ID	Zm.8792.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g56720: malate dehydrogenase, cytosolic, putative (HF=5e+0)
Module size	7 genes
NF	0.37
%ile	39.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.77	Zm.8792.1.A1_at	BM075656	-	-	5e+0	At5g56720	malate dehydrogenase, cytosolic, putative	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.84	Zm.607.1.A1_at	AF326495.1	plasma membrane integral protein ZmPIP2-6	-	2e-25	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.77	Zm.12033.1.A1_at	BM382797	cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase	-	8e-1	At3g59840	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.77	Zm.1177.1.S1_at	AY105040.1	hypothetical protein LOC100274218	-	3e-112	At5g03340	cell division cycle protein 48, putative / CDC48, putative	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.86	Zm.7617.1.S1_at	AB127981.1	minE protein	-	1e-7	At1g69390	ATMINE1 (Arabidopsis homologue of bacterial MinE 1)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.83	Zm.15439.1.A1_at	CD219438	-	-	3e-3	At2g31820	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.83	Zm.1090.2.A1_a_at	BU645209	PVR3-like protein /// PVR3-like protein /// PVR3-like protein	-	1e+0	At3g23930	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.6	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.8	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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