Co-expression analysis

Gene ID	Zm.8775.2.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g23830: GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4) (HF=9e-1)
Module size	9 genes
NF	0.45
%ile	54.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	55.7	0.97	Zm.8775.2.A1_at	AI065673	-	-	9e-1	At3g23830	GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4)	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.98	Zm.6497.1.A1_at	AI692097	serine/threonine-protein kinase AtPK19	-	5e+0	At3g08730	PK1 (PROTEIN-SERINE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.10091.1.A1_at	BM382104	hypothetical protein LOC100277849	-	6e+0	At4g16520	ATG8F (autophagy 8f)	O.I.	H.G.	S.X.	Please select
0.45	56.4	0.98	Zm.13565.1.S1_at	AY107994.1	-	-	1e-1	At5g44610	MAP18 (Microtubule-associated Protein 18)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.4780.1.S1_at	CF057781	-	-	3e+0	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.17950.1.A1_at	CK827767	-	-	3e-1	At2g03310	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.98	Zm.4109.1.A1_at	CD441071	NADP-dependent D-sorbitol-6-phosphate dehydrogenase /// NADP-dependent D-sorbitol-6-phosphate dehydrogenase	-	7e-38	At2g21250	mannose 6-phosphate reductase (NADPH-dependent), putative	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.98			-	-				O.I.	H.G.	S.X.	Please select
0.30	29.8	0.98	Zm.4510.3.S1_at	AI734509	hypothetical protein LOC100193304	-	2e-1	At5g24879	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.7	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.2	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.6	99.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.1	98.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.7	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.8	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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