Co-expression analysis

Gene ID Zm.8721.1.A1_at
Gene name catalytic/ oxidoreductase, acting on NADH or NADPH
Homology with ArabidopsisSimilar to At1g10530: unknown protein (HF=3e-1)
Module size 6 genes
NF 0.43
%ile 50.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.84Zm.8721.1.A1_atBM339688catalytic/ oxidoreductase, acting on NADH or NADPH-3e-1At1g10530unknown proteinO.I.H.G.S.X.
0.6785.80.89Zm.12740.1.S1_atCA404183hypothetical protein LOC100194228-4e-12At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)O.I.H.G.S.X.
0.5571.60.91Zm.1274.1.S1_atCO533399hypothetical protein LOC100272786-7e-1At2g38550unknown proteinO.I.H.G.S.X.
0.4455.70.89Zm.5121.1.S1_atCD441115--2e+0At2g15570thioredoxin M-type 3, chloroplast (TRX-M3)O.I.H.G.S.X.
0.4455.70.92Zm.4084.1.A1_atCK145425CONSTANS interacting protein 6-8e-1At5g28800unknown proteinO.I.H.G.S.X.
0.125.90.91ZmAffx.706.1.A1_atAI738209--8e-1At1g23590unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.2GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
5.497.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
4.996.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.30551.1.S1_at, orthologous to the query gene, Zm.8721.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.2TaAffx.30551.1.S1_atAt1g10530--3e-1At1g10530unknown proteinO.I.H.G.S.X.
0.3346.9Ta.9299.2.S1_atAt1g10530--1e+0At5g434402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.034.7Ta.20794.2.S1_x_atAt1g10530--7e-1At5g50680SAE1B (SUMO ACTIVATING ENZYME 1B)O.I.H.G.S.X.
0.023.6TaAffx.57838.1.S1_atAt1g10530--4e+0At4g13140-O.I.H.G.S.X.
0.012.4TaAffx.29732.1.S1_atAt1g10530--7e-1At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.H.G.S.X.
0.012.4Ta.24549.3.S1_atAt1g10530--7e-14At5g05710pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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