Co-expression analysis

Gene ID Zm.8721.1.A1_at
Gene name catalytic/ oxidoreductase, acting on NADH or NADPH
Homology with ArabidopsisSimilar to At1g10530: unknown protein (HF=3e-1)
Module size 6 genes
NF 0.43
%ile 50.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.84Zm.8721.1.A1_atBM339688catalytic/ oxidoreductase, acting on NADH or NADPH-3e-1At1g10530unknown proteinO.I.H.G.S.X.
0.6785.80.89Zm.12740.1.S1_atCA404183hypothetical protein LOC100194228-4e-12At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)O.I.H.G.S.X.
0.5571.60.91Zm.1274.1.S1_atCO533399hypothetical protein LOC100272786-7e-1At2g38550unknown proteinO.I.H.G.S.X.
0.4455.70.89Zm.5121.1.S1_atCD441115--2e+0At2g15570thioredoxin M-type 3, chloroplast (TRX-M3)O.I.H.G.S.X.
0.4455.70.92Zm.4084.1.A1_atCK145425CONSTANS interacting protein 6-8e-1At5g28800unknown proteinO.I.H.G.S.X.
0.125.90.91ZmAffx.706.1.A1_atAI738209--8e-1At1g23590unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.2GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
5.497.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
4.996.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At1g10530, orthologous to the query gene, Zm.8721.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
1.00100.0At1g10530837594unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;PO.I.H.G.S.X.
0.9396.4At1g07290837240nucleotide-sugar transmembrane transporterF:nucleotide-sugar transmembrane transporter activity;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.H.G.S.X.
0.9296.0At2g21610816699pectinesterase family proteinF:pectinesterase activity;P:N-terminal protein myristoylation, cell wall modification;C:cell wall, plant-type cell wall;PBFAMOO.I.H.G.S.X.
0.9095.1At1g21340838733Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;POO.I.H.G.S.X.
0.9095.1At5g51470835221auxin-responsive GH3 family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;POBMFO.I.H.G.S.X.
0.9095.1At4g26880828795stigma-specific Stig1 family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPOFMO.I.H.G.S.X.
0.8994.6At1g23160838924auxin-responsive GH3 family proteinF:unknown;P:response to auxin stimulus;C:unknown;OPBMFO.I.H.G.S.X.
0.8994.6At1g65570842868polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.H.G.S.X.
0.8894.0At1g44318841025hemb2F:porphobilinogen synthase activity, catalytic activity, metal ion binding;P:porphyrin biosynthetic process;C:unknown;OBMFAPO.I.H.G.S.X.
0.8894.0At4g19460827687glycosyl transferase family 1 proteinF:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:cellular_component unknown;BOAPMFO.I.H.G.S.X.
0.8894.0At1g04180837024flavin-containing monooxygenase family protein / FMO family proteinF:NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:unknown;BOFMPAO.I.H.G.S.X.
0.8894.0At2g04025814929unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.H.G.S.X.
0.8793.5At1g48070841225-F:molecular_function unknown;P:cell redox homeostasis;C:cellular_component unknown;BPOO.I.H.G.S.X.
0.8693.1At3g55550824720lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.H.G.S.X.
0.8491.9At1g04610839474flavin-containing monooxygenase / FMO (YUCCA3)F:oxidoreductase activity;P:auxin biosynthetic process;C:unknown;BOFMPAO.I.H.G.S.X.
0.8190.4At5g57420835848IAA33 (INDOLE-3-ACETIC ACID INDUCIBLE 33)Belongs to auxin inducible gene family.O.I.H.G.S.X.
0.8190.4At4g18450827576ethylene-responsive factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.O.I.H.G.S.X.
0.7989.1At5g57500835854transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:endomembrane system, membrane;PMOFO.I.H.G.S.X.
0.7788.0At3g19430821477late embryogenesis abundant protein-related / LEA protein-relatedF:structural constituent of cell wall;P:unknown;C:unknown;MBOFPVAO.I.H.G.S.X.
0.7788.0At4g23590828459aminotransferase class I and II family proteinF:1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity;P:cellular amino acid and derivative metabolic process, biosynthetic process;C:cellular_component unknown;BOPMAFO.I.H.G.S.X.
0.7486.1At1g50060841430pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.H.G.S.X.
0.7486.1At5g02070831776protein kinase-relatedF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.H.G.S.X.
0.7486.1At4g28720828993flavin-containing monooxygenase family protein / FMO family proteinF:oxidoreductase activity, monooxygenase activity;P:unknown;C:unknown;BOFMPAO.I.H.G.S.X.
0.7083.5At3g01840820047protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, cell wall macromolecule catabolic process;C:endomembrane system;MPOFBVAO.I.H.G.S.X.
0.6982.9At4g01240827909unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.6882.2At2g46850819298ATP binding / protein kinase/ protein tyrosine kinaseF:protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOFBVO.I.H.G.S.X.
0.6882.2At4g27400828848late embryogenesis abundant protein-related / LEA protein-relatedF:unknown;P:response to salt stress;C:endomembrane system;PO.I.H.G.S.X.
0.6781.6At2g40470818641LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)F:unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.H.G.S.X.
0.6781.6At5g66280836760GMD1 (GDP-D-MANNOSE 4,6-DEHYDRATASE 1)GDP-D-mannose 4,6-dehydrataseO.I.H.G.S.X.
0.6579.6At2g43480818949peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMO.I.H.G.S.X.
0.6176.7At5g51520835226invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:unknown;PO.I.H.G.S.X.
0.5873.8At1g33280840223ANAC015 (Arabidopsis NAC domain containing protein 15)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO.I.H.G.S.X.
0.5773.8At1g33750840266terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POO.I.H.G.S.X.
0.5773.8At5g60520836173late embryogenesis abundant protein-related / LEA protein-relatedF:molecular_function unknown;P:unknown;C:endomembrane system;PO.I.H.G.S.X.
0.5570.6At5g14020831250-F:unknown;P:N-terminal protein myristoylation;C:vacuole;PO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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