Co-expression analysis

Gene ID Zm.8692.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g14600: 60S ribosomal protein L18A (RPL18aC) (HF=5e-6)
Module size 10 genes
NF 0.36
%ile 37.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5065.70.92Zm.8692.1.A1_atBM337497--5e-6At3g1460060S ribosomal protein L18A (RPL18aC)O.I.H.G.S.X.
0.5674.40.96Zm.9364.1.A1_atBM334062--6e+0At4g29540bacterial transferase hexapeptide repeat-containing proteinO.I.H.G.S.X.
0.4658.40.96Zm.17007.1.A1_atCO526303hypothetical protein LOC100279469-1e+0At2g25780unknown proteinO.I.H.G.S.X.
0.4352.80.96Zm.14611.1.S1_atAY156979.1nitrilase 1-2e-14At5g22300NIT4 (NITRILASE 4)O.I.H.G.S.X.
0.4048.50.96Zm.860.1.A1_atAI600859--1e+0At1g32980subtilisin-like serine protease-relatedO.I.H.G.S.X.
0.3945.60.96Zm.6340.1.A1_atAI691460--1e+0At4g39730lipid-associated family proteinO.I.H.G.S.X.
0.3641.30.96ZmAffx.486.1.A1_atAI691392--3e+0At5g14800P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE)O.I.H.G.S.X.
0.2622.70.95Zm.2111.1.A1_atBM337757stem 28 kDa glycoprotein-9e+0At5g47680-O.I.H.G.S.X.
0.2622.70.94Zm.11849.1.A1_atBM381236hypothetical protein LOC100193472-2e+0At1g64930CYP89A7O.I.H.G.S.X.
0.136.80.95Zm.10513.1.S1_atAY105530.1hypothetical protein LOC100277818-1e-1At5g46730glycine-rich proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.498.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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