Co-expression analysis

Gene ID	Zm.8680.1.A1_at
Gene name	hypothetical protein LOC100277231
Homology with Arabidopsis	Similar to At1g70760: CRR23 ((chlororespiratory reduction 23) (HF=1e-3)
Module size	6 genes
NF	0.14
%ile	9.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.74	Zm.8680.1.A1_at	BM075162	hypothetical protein LOC100277231	-	1e-3	At1g70760	CRR23 ((chlororespiratory reduction 23)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.82	Zm.10177.1.A1_at	BM382782	-	-	9e-2	At2g41200	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.74	Zm.2593.1.S1_at	CA403212	ras-related protein ARA-3	-	5e-54	At5g59840	Ras-related GTP-binding family protein	O.I.	H.G.	S.X.	Please select
0.11	5.3	0.85	Zm.9842.1.A1_at	BM340816	-	-	3e-1	At5g20370	serine-rich protein-related	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.82	Zm.1281.1.S1_at	CD996711	-	-	7e-8	At1g51940	protein kinase family protein / peptidoglycan-binding LysM domain-containing protein	O.I.	H.G.	S.X.	Please select
0.04	1.5	0.85	Zm.12224.1.S1_at	CK370517	hypothetical protein LOC100278972	-	8e+0	At4g24380	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.4	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.6	98.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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