Co-expression analysis

Gene ID Zm.8619.1.S1_at
Gene name flower-specific gamma-thionin
Homology with ArabidopsisSimilar to At4g34160: CYCD3 (HF=5e-1)
Module size 6 genes
NF 0.49
%ile 62.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.94Zm.8619.1.S1_atAY109292.1flower-specific gamma-thionin-5e-1At4g34160CYCD3O.I.H.G.S.X.
0.4759.90.95Zm.13249.2.A1_atCF012746--1e+0At1g35255unknown proteinO.I.H.G.S.X.
0.4048.50.96Zm.4619.2.A1_a_atCK370334hypothetical protein LOC100273548-5e-29At4g31120SKB1 (SHK1 BINDING PROTEIN 1)O.I.H.G.S.X.
0.3641.30.96Zm.16934.1.A1_atAY108912.1transcriptional regulatory protein algP-3e-1At4g03580-O.I.H.G.S.X.
0.3538.90.96Zm.17270.1.S1_a_atAF371274.1zein-alpha precursor-5e-1At1g06070bZIP transcription factor, putative (bZIP69)O.I.H.G.S.X.
0.3131.60.96ZmAffx.963.1.A1_s_atAI833792hypothetical protein LOC100272453-8e-1At4g04620ATG8B (autophagy 8b)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.498.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.190.8GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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