Co-expression analysis

Gene ID Zm.8617.1.A1_at
Gene name hypothetical protein LOC100194322
Homology with ArabidopsisSimilar to At4g29810: ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2) (HF=2e+0)
Module size 34 genes
NF 0.35
%ile 36.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.50.96Zm.8617.1.A1_atBM074921hypothetical protein LOC100194322-2e+0At4g29810ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2)O.I.H.G.S.X.
0.5369.10.96Zm.5058.1.A1_atBG266535hypothetical protein LOC100217195-4e+0At4g33960unknown proteinO.I.H.G.S.X.
0.4961.90.96Zm.17085.1.A1_atAW562719sialyltransferase like protein-7e-8At1g08660glycosyl transferase family 29 protein / sialyltransferase family proteinO.I.H.G.S.X.
0.4759.90.96Zm.5965.1.A1_atAI665966Hypothetical protein LOC100192560-2e+0At5g19140AILP1O.I.H.G.S.X.
0.4759.90.96Zm.12165.1.A1_atBI595866ABC-type Co2+ transport system, permease component-4e-1At1g15900unknown proteinO.I.H.G.S.X.
0.4251.30.96Zm.13669.1.A1_atAY107043.1--2e-1At3g26420ATRZ-1AO.I.H.G.S.X.
0.4149.70.96Zm.5676.1.A1_atAY103939.1--3e-1At5g14710-O.I.H.G.S.X.
0.4149.70.97Zm.18045.1.A1_atBM080270--8e-4At1g22180SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.4149.70.96Zm.1462.1.S1_atBE050472hypothetical protein LOC100276194-1e+0At5g41760nucleotide-sugar transporter family proteinO.I.H.G.S.X.
0.4048.50.96Zm.9564.1.S1_atAY106249.1Transcribed sequence 1087 protein-8e-1At3g01323unknown proteinO.I.H.G.S.X.
0.4048.50.97Zm.14496.1.A1_atCF014750sesquiterpene cyclase-like-1e+0At5g46710zinc-binding family proteinO.I.H.G.S.X.
0.4048.50.96Zm.13861.1.A1_atAF439721.1methionine adenosyltransferase-2e-113At2g36880MAT3 (methionine adenosyltransferase 3)O.I.H.G.S.X.
0.3945.60.97Zm.2094.1.S1_atCD651096hypothetical protein LOC100192908-8e-19At2g36060ubiquitin-conjugating enzyme family proteinO.I.H.G.S.X.
0.3844.20.96Zm.9861.1.A1_atBM341707hypothetical protein LOC100275244-5e+0At1g60060unknown proteinO.I.H.G.S.X.
0.3742.30.97Zm.4758.1.S1_atAY111436.1--1e+0At4g17890AGD8 (ARF-GAP DOMAIN 8)O.I.H.G.S.X.
0.3538.90.96Zm.2517.3.A1_x_atAF371272.1zein polypeptidesL2b-9e-1At5g62360invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.3437.20.96Zm.4883.1.S1_atAI782987hypothetical protein LOC100216906-4e-3At2g37650scarecrow-like transcription factor 9 (SCL9)O.I.H.G.S.X.
0.3437.20.96Zm.13825.1.S1_atAY104501.1--9e-7At3g01910SOX (SULFITE OXIDASE)O.I.H.G.S.X.
0.3437.20.97Zm.5280.1.S1_atCK368650--2e-8At1g76760ATY1 (ARABIDOPSIS THIOREDOXIN Y1)O.I.H.G.S.X.
0.3233.40.97Zm.10135.1.A1_atBM381166--1e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.3131.60.97Zm.5180.1.A1_atAI612313--1e+1At5g27090AGL54O.I.H.G.S.X.
0.3029.80.96Zm.4392.2.A1_x_atAW787551Ran-related GTP binding protein-3e-63At5g20020RAN2O.I.H.G.S.X.
0.2828.10.96ZmAffx.469.1.A1_atAI677417--3e+0At2g45250unknown proteinO.I.H.G.S.X.
0.2828.10.96Zm.12977.1.S1_a_atAY105605.1hypothetical protein LOC100193319-1e-4At1g15370-O.I.H.G.S.X.
0.2828.10.96Zm.5093.1.A1_atAI600800GAGA-binding protein-4e-4At1g14685BPC2 (BASIC PENTACYSTEINE 2)O.I.H.G.S.X.
0.2828.10.96ZmAffx.1064.1.A1_atAI881965--8e-1At5g44450methyltransferaseO.I.H.G.S.X.
0.2828.10.97Zm.18133.1.A1_atAY103981.1--8e-38At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.H.G.S.X.
0.2622.70.97Zm.2997.1.S1_atCD983066REX1 DNA Repair family protein-6e+0At5g35525unknown proteinO.I.H.G.S.X.
0.2622.70.97Zm.9888.2.A1_a_atBM334632--5e+0At4g16510YbaK/prolyl-tRNA synthetase-relatedO.I.H.G.S.X.
0.2521.30.97Zm.15194.1.A1_atBM334114--4e+0At1g16025unknown proteinO.I.H.G.S.X.
0.2419.80.96Zm.9661.1.A1_atBM335503--4e+0At5g04470SIM (SIAMESE)O.I.H.G.S.X.
0.2419.80.97Zm.8176.1.A1_atAY107848.1hypothetical protein LOC100280367-4e+0At4g04423endo-1,3(4)-beta-glucanaseO.I.H.G.S.X.
0.2318.60.97Zm.12997.1.S1_atCA402647--2e-21At3g46740TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III)O.I.H.G.S.X.
0.1912.80.97Zm.12674.1.A1_atCN845329--5e-5At1g34350unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.598.6GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
7.397.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
6.297.4GSM253258ZM_2d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
5.997.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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