Co-expression analysis

Gene ID Zm.8614.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g01640: - (HF=1e-1)
Module size 32 genes
NF 0.41
%ile 46.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.50.96Zm.8614.1.A1_atBM341063--1e-1At4g01640-O.I.H.G.S.X.
0.6886.10.97Zm.10503.1.S1_atAY108225.1hypothetical protein LOC100278403-8e-1At4g20010PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE 9)O.I.H.G.S.X.
0.5571.60.99ZmAffx.180.1.S1_atAI668329--8e-1At1g17235RTFL11 (ROTUNDIFOLIA LIKE 11)O.I.H.G.S.X.
0.5469.80.99Zm.18313.1.A1_atCO532950hypothetical protein LOC100193523-8e-11At5g42990UBC18 (ubiquitin-conjugating enzyme 18)O.I.H.G.S.X.
0.5369.10.98Zm.4795.2.S1_atAI740164--2e-1At4g28703-O.I.H.G.S.X.
0.5267.30.98ZmAffx.822.1.S1_atAI770502--2e-1At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.5166.40.98ZmAffx.1361.1.S1_at40794996-49--7e-1At3g10940protein phosphatase-relatedO.I.H.G.S.X.
0.4759.90.99ZmAffx.1134.1.A1_atAW331087--8e-1At4g10270wound-responsive family proteinO.I.H.G.S.X.
0.4658.40.99ZmAffx.863.1.S1_atAI770721uracil phosphoribosyltransferase-1e+1Atcg01300-O.I.H.G.S.X.
0.4455.70.99ZmAffx.1409.1.S1_at40794996-84--2e+0At4g15790unknown proteinO.I.H.G.S.X.
0.4352.80.99Zm.18312.1.S1_atCK827776hypothetical protein LOC100279515-7e-17At3g13510unknown proteinO.I.H.G.S.X.
0.4352.80.99ZmAffx.114.1.A1_atAI665586--9e-13At5g18100CSD3 (copper/zinc superoxide dismutase 3)O.I.H.G.S.X.
0.4251.30.98Zm.10420.1.S1_atCF636800BS14b-7e+0At5g28800unknown proteinO.I.H.G.S.X.
0.4251.30.99ZmAffx.1498.1.S1_s_at40794996-115--9e-147Atcg01310-O.I.H.G.S.X.
0.4149.70.99ZmAffx.1469.1.S1_at11990232-36--2e-38Atcg00560-O.I.H.G.S.X.
0.4048.50.99ZmAffx.1362.1.S1_at11990232-90--1e-156Atcg01100-O.I.H.G.S.X.
0.4048.50.99ZmAffx.1342.1.S1_at40794996-150--9e-31Atmg00620-O.I.H.G.S.X.
0.4048.50.97Zm.11486.1.S1_atCD441287hypothetical protein LOC100216606-1e-5At2g31350GLX2-5 (GLYOXALASE 2-5)O.I.H.G.S.X.
0.3945.60.98ZmAffx.1340.1.S1_at11990232-88--7e-45Atcg01080-O.I.H.G.S.X.
0.3844.20.98ZmAffx.822.1.A1_atAI770502--2e-1At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.3844.20.99ZmAffx.1341.1.S1_at11990232-89--2e-119Atcg01090-O.I.H.G.S.X.
0.3742.31.00ZmAffx.1535.1.S1_at40794996-15--0Atmg01275-O.I.H.G.S.X.
0.3641.30.99ZmAffx.1379.1.S1_at40794996-54--1e+1At4g38781unknown proteinO.I.H.G.S.X.
0.3641.30.99ZmAffx.537.1.S1_atAI711809--3e+0At5g47610zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3538.90.99ZmAffx.15.1.A1_atAI491598hypothetical protein LOC100279806 /// hypothetical protein LOC100280386-7e+0At5g09370protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3437.20.99ZmAffx.137.1.A1_atAI667708Hypothetical protein LOC100192022-8e-1At2g45130SPX3 (SPX DOMAIN GENE 3)O.I.H.G.S.X.
0.3233.40.99ZmAffx.1344.1.S1_at40794996-152--9e+0Atmg00550-O.I.H.G.S.X.
0.3233.40.99ZmAffx.1347.1.S1_s_at40794996-41--2e+0At3g18050unknown proteinO.I.H.G.S.X.
0.3131.60.99ZmAffx.1459.1.S1_at11990232-26--6e-148Atcg00430-O.I.H.G.S.X.
0.3131.60.99ZmAffx.1418.1.S1_at40794996-93--9e-78Atmg00960-O.I.H.G.S.X.
0.3131.60.98Zm.5158.1.S1_atAY106564.1hypothetical protein LOC100274429-3e-6At2g38560TFIIS (TRANSCRIPT ELONGATION FACTOR IIS)O.I.H.G.S.X.
0.3029.80.99Zm.9233.1.A1_atBM348207pollen allergen Phl p 2-5e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.498.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.888.9GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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