| Gene ID | Zm.859.1.A1_at |
| Gene name | hypothetical protein LOC100191283 |
| Homology with Arabidopsis | Similar to At4g28420: aminotransferase, putative (HF=8e-1) |
| Module size | 6 genes |
| NF | 0.63 |
| %ile | 84.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.83 | 95.6 | 0.97 | Zm.859.1.A1_at | CF060267 | hypothetical protein LOC100191283 | - | 8e-1 | At4g28420 | aminotransferase, putative | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.97 | Zm.5229.1.A1_at | CO519750 | ATP-dependent transporter ycf16 | - | 4e-24 | At3g10670 | ATNAP7 | O.I. | H.G. | S.X. | |
| 0.60 | 77.8 | 0.98 | Zm.17189.1.A1_at | BM268883 | - | - | 5e+0 | At5g60540 | PDX2 (PYRIDOXINE BIOSYNTHESIS 2) | O.I. | H.G. | S.X. | |
| 0.53 | 69.1 | 0.97 | Zm.15306.1.A1_at | CK369690 | phytol kinase | - | 9e+0 | Atmg00160 | - | O.I. | H.G. | S.X. | |
| 0.40 | 48.5 | 0.98 | Zm.7750.4.S1_at | AW499152 | - | - | 3e-28 | At1g75780 | TUB1 | O.I. | H.G. | S.X. | |
| 0.40 | 48.5 | 0.98 | Zm.2548.1.A1_at | AY106256.1 | - | - | 2e-26 | At4g02570 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 12.6 | 98.7 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.3 | 98.7 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.0 | 98.6 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.6 | 98.3 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.7 | 98.1 | GSM202319 | Mo17 19 day after pollination embryo tissue, biological replicate 3 | GSE8179 | Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data | |
| 8.1 | 98.0 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.1 | 97.7 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.5 | 96.3 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.1 | 95.9 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.8 | 95.5 | GSM202314 | Mo17 19 day after pollination embryo tissue, biological replicate 2 | GSE8179 | Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.2 | PtpAffx.9887.2.S1_at | At4g28420 | - | - | 2e-3 | At5g53970 | aminotransferase, putative | O.I. | H.G. | S.X. | |
| 0.73 | 93.6 | PtpAffx.118706.1.S1_at | At4g28420 | hypothetical protein | - | 6e-2 | At1g02065 | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8) | O.I. | H.G. | S.X. | |
| 0.67 | 91.1 | Ptp.5393.1.S1_at | At4g28420 | hypothetical protein | - | 1e-84 | At4g38510 | vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative | O.I. | H.G. | S.X. | |
| 0.61 | 87.0 | PtpAffx.1601.27.S1_at | At4g28420 | hypothetical protein | - | 1e+1 | At5g62980 | dihydroneopterin aldolase, putative | O.I. | H.G. | S.X. | |
| 0.44 | 71.9 | PtpAffx.158107.3.S1_at | At4g28420 | hypothetical protein | - | 7e+0 | At5g22440 | 60S ribosomal protein L10A (RPL10aC) | O.I. | H.G. | S.X. | |
| 0.44 | 71.9 | PtpAffx.106310.1.A1_s_at | At4g28420 | hypothetical protein | - | 1e+0 | At5g03210 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Triticum_aestivum |
| Vitis_vinifera |
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