Co-expression analysis

Gene ID Zm.8561.2.A1_a_at
Gene name hypothetical protein LOC100277438
Homology with ArabidopsisSimilar to At4g05070: unknown protein (HF=4e+0)
Module size 15 genes
NF 0.57
%ile 75.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.94Zm.8561.2.A1_a_atBM332166hypothetical protein LOC100277438-4e+0At4g05070unknown proteinO.I.H.G.S.X.
0.7087.00.95Zm.6443.1.A1_atCA404297hypothetical protein AY107910-4e-25At2g02560CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED)O.I.H.G.S.X.
0.6986.50.96Zm.18743.1.A1_atCK985678palmitoyltransferase ZDHHC9-6e-17At5g50020zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.6986.50.95Zm.2601.1.S1_atU45856.1cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 /// glyceraldehyde-3-phosphate dehydrogenase-3e-139At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.H.G.S.X.
0.6381.10.95Zm.56.1.S1_atU12233.1GTP binding protein2-4e-9At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.6381.10.96Zm.4190.1.A1_atBE344878--9e-31At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.5976.10.96Zm.5290.1.S1_atAY104548.1F-box domain containing protein-4e+0At3g07260forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.5674.40.95Zm.9058.1.A1_atBM266530--5e+0At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)O.I.H.G.S.X.
0.5166.40.95Zm.14040.1.A1_atCF051487C-4 methylsterol oxidase-6e-20At4g22756SMO1-2 (STEROL C4-METHYL OXIDASE 1-2)O.I.H.G.S.X.
0.4961.90.95Zm.2376.4.A1_x_atCK368489cortical cell-delineating protein-6e+0At3g24510-O.I.H.G.S.X.
0.4861.30.95Zm.9958.2.A1_atCA399148--2e+0At5g17480APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)O.I.H.G.S.X.
0.4658.40.95Zm.5277.1.S1_atAI619073--1e+0At4g39750F-box family protein-relatedO.I.H.G.S.X.
0.4658.40.96Zm.3772.1.S1_atCF010220Zea m 1 allergen-6e-4At2g40470LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)O.I.H.G.S.X.
0.4455.70.95Zm.15961.1.S1_a_atCK369834--4e-1At3g19920unknown proteinO.I.H.G.S.X.
0.4455.70.95Zm.3756.1.A1_atBE025409--8e-3At2g24520AHA5 (Arabidopsis H(+)-ATPase 5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.899.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.599.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.299.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.599.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.698.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.598.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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