Co-expression analysis

Gene ID Zm.853.1.A1_at
Gene name hypothetical protein LOC100276013
Homology with ArabidopsisSimilar to At4g01150: unknown protein (HF=2e-12)
Module size 6 genes
NF 0.68
%ile 89.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.94Zm.853.1.A1_atAI395965hypothetical protein LOC100276013-2e-12At4g01150unknown proteinO.I.H.G.S.X.
0.7792.10.95Zm.3570.1.A1_atBG840178--6e-1At1g54260histone H1/H5 family proteinO.I.H.G.S.X.
0.6785.80.95Zm.3569.1.A1_atCO518726hypothetical protein LOC100280101-5e+0At3g55600-O.I.H.G.S.X.
0.6785.80.96Zm.3571.1.S1_atBG265645Hypothetical protein LOC100193516-4e+0At4g17030ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)O.I.H.G.S.X.
0.5775.10.95Zm.6703.1.A1_atCA398710hypothetical protein LOC100273224-1e+0At2g01120ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4)O.I.H.G.S.X.
0.3336.00.95Zm.6243.1.A1_atAI677547--7e-2At5g22460esterase/lipase/thioesterase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.396.9GSM320441protocol: mRNA - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM253263ZM_4d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.896.6GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.696.4GSM253258ZM_2d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.596.3GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.895.5GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.895.5GSM253264ZM_4d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.795.4GSM253268ZM_4.5d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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