Co-expression analysis

Gene ID Zm.8519.1.A1_at
Gene name hypothetical protein LOC100274605
Homology with ArabidopsisSimilar to At3g11745: unknown protein (HF=5e+0)
Module size 16 genes
NF 0.14
%ile 8.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.92Zm.8519.1.A1_atBQ635374hypothetical protein LOC100274605-5e+0At3g11745unknown proteinO.I.H.G.S.X.
0.3233.40.95Zm.10116.1.A1_atAY108928.1--5e+0At3g06790plastid developmental protein DAG, putativeO.I.H.G.S.X.
0.2521.30.94Zm.15419.1.S1_atAY108100.1hypothetical protein LOC100193995-2e-4At5g51430EYE (EMBRYO YELLOW)O.I.H.G.S.X.
0.2318.60.96Zm.4036.1.A1_atCD994340tyrosine specific protein phosphatase family protein-1e-11At1g05000tyrosine specific protein phosphatase family proteinO.I.H.G.S.X.
0.2216.90.97Zm.18673.1.A1_atCK828084BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-2e+0At3g59350serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.2216.90.97Zm.2308.1.A1_atBG841336hypothetical protein LOC100276079-2e-2At5g66005Expressed proteinO.I.H.G.S.X.
0.2014.20.97Zm.16687.1.S1_atCF636696hypothetical protein LOC100194066-3e-3At5g07250ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)O.I.H.G.S.X.
0.169.40.97Zm.11667.1.A1_atCF633574hypothetical protein LOC100274234-4e-1At4g39630unknown proteinO.I.H.G.S.X.
0.169.40.96Zm.5229.1.A1_atCO519750ATP-dependent transporter ycf16-4e-24At3g10670ATNAP7O.I.H.G.S.X.
0.147.70.95Zm.2478.2.A1_atAI737453Hypothetical protein LOC100191471-7e-2At5g60490FLA12O.I.H.G.S.X.
0.147.70.97ZmAffx.853.1.S1_atAI770653heavy metal-associated domain containing protein-2e-1At3g06130heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.125.90.97Zm.4044.2.S1_atAI834066--2e+0At5g13780GCN5-related N-acetyltransferase, putativeO.I.H.G.S.X.
0.125.90.96Zm.7704.1.A1_atBM079575hypothetical protein LOC100278612-5e-3At1g62240unknown proteinO.I.H.G.S.X.
0.104.60.95Zm.859.1.A1_atCF060267hypothetical protein LOC100191283-8e-1At4g28420aminotransferase, putativeO.I.H.G.S.X.
0.094.00.95Zm.13700.1.S1_atCF634202hypothetical protein LOC100193445-5e-1At1g14990unknown proteinO.I.H.G.S.X.
0.041.50.94Zm.2862.2.S1_atAY112482.1Calnexin-1e-61At5g61790calnexin 1 (CNX1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.291.3GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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