Co-expression analysis

Gene ID	Zm.8481.1.A1_at
Gene name	hypothetical protein LOC100193693
Homology with Arabidopsis	Similar to At1g04645: self-incompatibility protein-related (HF=3e-1)
Module size	6 genes
NF	0.59
%ile	79.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.95	Zm.8481.1.A1_at	BM074317	hypothetical protein LOC100193693	-	3e-1	At1g04645	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.95	ZmAffx.561.1.S1_at	AI714590	Hypothetical protein LOC100192917	-	3e+0	At4g36100	-	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.94	Zm.12374.1.S1_at	BQ577812	-	-	3e+0	At1g66800	cinnamyl-alcohol dehydrogenase family / CAD family	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.95	Zm.16789.1.S1_a_at	AY530962.1	26S protease regulatory subunit 6B /// 26S proteasome regulatory complex ATPase RPT3	-	3e-77	At5g58290	RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.95	Zm.4273.2.A1_at	AI665197	heat shock 70 kDa protein 4	-	3e-10	At1g79920	ATP binding	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.96	Zm.12531.1.A1_at	AI740174	-	-	2e+0	At3g27328	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
17.2	99.1	GSM320443	protocol: mRNA - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM206332	Lower pulvinus 15 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.5	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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