Co-expression analysis

Gene ID	Zm.8456.1.A1_at
Gene name	hypothetical protein LOC100273451
Homology with Arabidopsis	Similar to At5g14020: - (HF=5e+0)
Module size	6 genes
NF	0.32
%ile	30.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.8	0.93	Zm.8456.1.A1_at	BM335025	hypothetical protein LOC100273451	-	5e+0	At5g14020	-	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.94	Zm.12034.1.A1_at	BM382798	hypothetical protein LOC100273559	-	4e+0	At1g08570	ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.94	Zm.1063.1.A1_at	BM332190	-	-	1e-9	At1g25350	OVA9 (ovule abortion 9)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.94	Zm.16229.1.A1_at	CF017148	microtubule-associated protein MAP65-1a	-	5e+0	At3g56110	PRA1.B1 (PRENYLATED RAB ACCEPTOR 1.B1)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.96	Zm.12577.1.A1_at	AF527610.1	DNA methyl transferase 106	-	3e-1	At3g25680	-	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.95	Zm.14438.1.A1_at	CO520860	VAMP-like protein YKT62	-	4e-12	At5g58180	ATYKT62	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.4	98.4	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
7.5	97.8	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
5.3	96.9	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
5.1	96.8	GSM320471	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.7	96.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.2	96.0	GSM320468	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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