Co-expression analysis

Gene ID Zm.8326.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g07100: WRKY26 (HF=1e+0)
Module size 18 genes
NF 0.78
%ile 97.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8595.90.92Zm.8326.1.A1_atBM073693--1e+0At5g07100WRKY26O.I.H.G.S.X.
0.9299.20.93Zm.1461.1.A1_atBM267604--4e-1At2g40380PRA1.B2 (PRENYLATED RAB ACCEPTOR 1.B2)O.I.H.G.S.X.
0.9199.00.95Zm.11814.1.A1_atBM380947copper transporter 1-1e+1At4g01150unknown proteinO.I.H.G.S.X.
0.9199.00.95Zm.15425.2.A1_atCO521234--4e-1At1g09760U2A' (U2 small nuclear ribonucleoprotein A)O.I.H.G.S.X.
0.9097.00.94Zm.8898.1.A1_atAI737203serine/threonine-protein kinase SNT7-1e-36At1g68830STN7 (Stt7 homolog STN7)O.I.H.G.S.X.
0.8996.80.93Zm.999.1.A1_atCK37013360S ribosomal protein L34-3e-4At1g2688060S ribosomal protein L34 (RPL34A)O.I.H.G.S.X.
0.8696.30.93Zm.4683.1.A1_atCA401684--8e+0At3g10020unknown proteinO.I.H.G.S.X.
0.8595.90.95Zm.15334.1.A1_atCB351107hypothetical protein LOC100277432-5e+0At1g01570fringe-related proteinO.I.H.G.S.X.
0.8495.80.95Zm.8706.1.A1_atBM075281--4e+0At4g05050UBQ11 (UBIQUITIN 11)O.I.H.G.S.X.
0.8094.00.94Zm.8148.1.A1_atBM073081--6e-13At3g58190LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)O.I.H.G.S.X.
0.8094.00.95ZmAffx.406.5.A1_atAI670502--2e-1At2g41760unknown proteinO.I.H.G.S.X.
0.7691.10.94ZmAffx.406.4.S1_atAI670535--2e-1At2g20560DNAJ heat shock family proteinO.I.H.G.S.X.
0.7590.80.95Zm.9670.2.S1_atAY110378.1--4e-4At1g60660CB5LP (CYTOCHROME B5-LIKE PROTEIN)O.I.H.G.S.X.
0.7590.80.97Zm.8697.1.A1_atBM079294IN2-1 protein-2e-6At5g02790In2-1 protein, putativeO.I.H.G.S.X.
0.6785.80.94Zm.9772.1.A1_atBM340296hypothetical protein LOC100273847-5e+0At3g43740leucine-rich repeat family proteinO.I.H.G.S.X.
0.6381.10.95Zm.9563.1.A1_atAY072297.1flavonoid 3-monooxygenase-3e+0At4g16410unknown proteinO.I.H.G.S.X.
0.5976.10.92Zm.6882.2.A1_atBG837779hypothetical protein LOC100191938-4e-2At1g0110060S acidic ribosomal protein P1 (RPP1A)O.I.H.G.S.X.
0.4961.90.94Zm.18259.1.A1_s_atCN844705B12D protein-2e+1At5g4577560S ribosomal protein L11 (RPL11D)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.298.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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