Co-expression analysis

Gene ID Zm.8311.2.A1_a_at
Gene name
Homology with ArabidopsisSimilar to At4g23090: unknown protein (HF=4e+0)
Module size 30 genes
NF 0.52
%ile 67.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8194.30.99Zm.8311.2.A1_a_atBM073622--4e+0At4g23090unknown proteinO.I.H.G.S.X.
0.7087.00.99ZmAffx.976.1.A1_atAI833931--1e-2At4g23880unknown proteinO.I.H.G.S.X.
0.6682.30.99Zm.13228.1.S1_atCA452580LHT1-5e+0At4g17585unknown proteinO.I.H.G.S.X.
0.6582.10.99Zm.6650.1.A1_atBM336595fiber protein Fb2-3e+0At5g35695unknown proteinO.I.H.G.S.X.
0.6582.10.99Zm.13940.1.S1_atAI677337hypothetical protein LOC100193246-1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.6481.70.99Zm.4848.2.S1_a_atAI770366SIR2-like histone deacetylase-2e-1At5g55760SRT1 (sirtuin 1)O.I.H.G.S.X.
0.6279.80.99ZmAffx.1051.1.S1_atAI881809hypothetical protein LOC100272557-2e-1At3g01790ribosomal protein L13 family proteinO.I.H.G.S.X.
0.6279.80.99Zm.13588.1.A1_atAY107800.1--1e+0At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.6179.50.99Zm.5028.1.S1_atAY103976.1splicing factor, arginine/serine-rich 12-1e+0At4g23770unknown proteinO.I.H.G.S.X.
0.5976.10.99Zm.9940.1.A1_atBM339055--3e-2At5g26860LON1 (LON PROTEASE 1)O.I.H.G.S.X.
0.5775.10.99Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.5674.40.99Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinO.I.H.G.S.X.
0.5674.40.99ZmAffx.781.1.A1_atAI746268--1e+1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)O.I.H.G.S.X.
0.5674.40.99ZmAffx.13.1.S1_s_atAY372245.1cellulose synthase 11-2e-61At4g18780IRX1 (IRREGULAR XYLEM 1)O.I.H.G.S.X.
0.5571.60.99Zm.13616.1.S1_atAY107497.1--2e+0At4g25315Expressed proteinO.I.H.G.S.X.
0.5469.80.99Zm.327.1.S1_atAB042270.1histidine kinase 1-3e-14At2g01830WOL (WOODEN LEG)O.I.H.G.S.X.
0.5369.10.99Zm.2805.1.A1_atAW352682hypothetical protein LOC100274443-5e+0At4g13266unknown proteinO.I.H.G.S.X.
0.5267.30.99Zm.2614.2.A1_atCD436098--4e-1At4g31780MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1)O.I.H.G.S.X.
0.5166.40.99Zm.16320.1.S1_atCO526259hypothetical protein LOC100193231-3e-6At3g19910zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4961.90.99ZmAffx.1117.1.S1_atAW257962--2e+0At3g15150zinc ion bindingO.I.H.G.S.X.
0.4658.40.99Zm.3610.1.A1_atAW065778hypothetical protein LOC100276901-2e+0At4g04360unknown proteinO.I.H.G.S.X.
0.4455.71.00Zm.4171.1.A1_atBG841769isoamyl acetate-hydrolyzing esterase-3e+0At1g691902-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase/ dihydropteroate synthaseO.I.H.G.S.X.
0.4352.80.99Zm.8664.1.A1_atBM338299hypothetical protein LOC100274639-2e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.
0.4352.80.99Zm.434.1.A1_atAF069909.1pyruvate dehydrogenase E1 beta subunit isoform 2-7e-23At5g50850MAB1 (MACCI-BOU)O.I.H.G.S.X.
0.4048.50.99Zm.18954.1.A1_atCO533875hypothetical protein LOC100273399-2e+0At1g68960unknown proteinO.I.H.G.S.X.
0.3945.60.99Zm.2763.1.S1_atAW067129hypothetical protein LOC100191545-9e-7At1g19710glycosyl transferase family 1 proteinO.I.H.G.S.X.
0.3945.60.99ZmAffx.105.1.S1_atAI665537--3e+0At4g20000VQ motif-containing proteinO.I.H.G.S.X.
0.3844.20.99Zm.14302.1.A1_atBG841920proteasome subunit alpha type 3-9e-28At2g27020PAG1O.I.H.G.S.X.
0.3336.00.99Zm.5813.1.A1_atCF056763hypothetical protein LOC100191474-8e-32At5g55310TOP1BETA (DNA TOPOISOMERASE 1 BETA)O.I.H.G.S.X.
0.3131.60.99Zm.9508.1.A1_atBM351117--9e-3At5g28040transcription regulatorO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.098.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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