Co-expression analysis

Gene ID	Zm.8287.1.A1_at
Gene name	hypothetical protein LOC100192745
Homology with Arabidopsis	Similar to At5g65740: protein binding / zinc ion binding (HF=5e+0)
Module size	12 genes
NF	0.57
%ile	75.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.94	Zm.8287.1.A1_at	AI737226	hypothetical protein LOC100192745	-	5e+0	At5g65740	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.85	95.9	0.96	Zm.13593.1.S1_at	AY107755.1	-	-	1e-8	At5g60620	phospholipid/glycerol acyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.19352.1.S1_at	CO532449	-	-	2e-16	At5g49990	xanthine/uracil permease family protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.97	Zm.6321.1.A1_at	AI691388	-	-	2e-1	At3g17440	NPSN13 (NOVEL PLANT SNARE 13)	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.98	Zm.3808.1.S1_at	CF010880	low-molecular-weight cysteine-rich protein LCR68	-	5e+0	At4g02850	phenazine biosynthesis PhzC/PhzF family protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.97	Zm.5922.1.A1_at	CN844887	DNA-binding protein S1FA2	-	2e+0	At1g16250	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.52	67.3	0.97	Zm.810.1.S1_at	CF006379	-	-	6e-69	At5g45550	mob1/phocein family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.96	Zm.2617.1.A1_at	AI964629	-	-	9e+0	At4g34190	SEP1 (STRESS ENHANCED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.96	Zm.15682.1.S1_at	AY107736.1	holocarboxylase synthetase	-	8e+0	At5g42290	transcription activator-related	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.13811.1.A1_at	AY104705.1	-	-	2e+0	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.96	Zm.4421.1.A1_at	AI987199	hypothetical protein LOC100279541	-	5e+0	At1g77640	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.97	Zm.19306.1.A1_at	AI664819	hypothetical protein LOC100193355	-	6e-1	At4g13720	inosine triphosphate pyrophosphatase, putative / HAM1 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.0	98.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.1	90.8	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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