Co-expression analysis

Gene ID	Zm.8283.1.S1_at
Gene name	hypothetical protein LOC100276098
Homology with Arabidopsis	Similar to At3g21865: PEX22 (peroxin 22) (HF=7e-1)
Module size	7 genes
NF	0.30
%ile	27.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.95	Zm.8283.1.S1_at	BM073508	hypothetical protein LOC100276098	-	7e-1	At3g21865	PEX22 (peroxin 22)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.94	Zm.5046.1.S1_at	AY104119.1	hypothetical protein LOC100191234 /// hypothetical protein LOC100273435	-	3e-19	At3g53580	diaminopimelate epimerase family protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.96	Zm.8573.1.S1_at	BU051013	-	-	2e+1	At5g01640	PRA1.B5 (PRENYLATED RAB ACCEPTOR 1.B5)	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.96	Zm.14051.1.S1_at	CF625739	hypothetical protein LOC100217091	-	5e-1	At5g38650	proteasome maturation factor UMP1 family protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	Zm.3786.1.S1_at	BG841716	hypothetical protein LOC100273838	-	3e-3	At5g54680	ILR3 (iaa-leucine resistant3)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	Zm.7777.1.A1_at	BM079863	F-box domain containing protein	-	5e+0	At5g60964	-	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.95	Zm.5802.1.A1_at	AI649723	hypothetical protein LOC100193125	-	2e+0	At4g31450	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.7	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.1	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
1.9	89.6	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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