Co-expression analysis

Gene ID Zm.828.1.A1_at
Gene name hypothetical protein LOC100277560
Homology with ArabidopsisSimilar to At3g21371: unknown protein (HF=5e+0)
Module size 14 genes
NF 0.72
%ile 93.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7490.30.96Zm.828.1.A1_atAI734461hypothetical protein LOC100277560-5e+0At3g21371unknown proteinO.I.H.G.S.X.
0.8595.90.97Zm.3484.1.A1_atAW438127hypothetical protein LOC100273241-2e+0At1g67700unknown proteinO.I.H.G.S.X.
0.8395.60.98Zm.5441.1.S1_atCO528962hypothetical protein LOC100274317-3e+0At3g23130SUP (SUPERMAN)O.I.H.G.S.X.
0.8395.60.98Zm.16482.2.A1_atBM337760--9e-19At3g0963060S ribosomal protein L4/L1 (RPL4A)O.I.H.G.S.X.
0.8194.30.97Zm.5917.1.A1_a_atBM337345hypothetical protein LOC100192679-2e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.
0.7590.80.97Zm.5220.1.S1_atAI614989hypothetical protein LOC100279470-1e+0At5g36120CCB3 (COFACTOR ASSEMBLY, COMPLEX C (B6F),)O.I.H.G.S.X.
0.7188.20.96Zm.10315.1.S1_atAF461732.1uncoupling protein-6e-5At5g58970ATUCP2 (UNCOUPLING PROTEIN 2)O.I.H.G.S.X.
0.6986.50.97Zm.4462.1.A1_atAI714968--1e+1At4g00342unknown proteinO.I.H.G.S.X.
0.6986.50.97Zm.4667.1.A1_atBG266366hypothetical protein LOC100274574-4e-1At1g32780alcohol dehydrogenase, putativeO.I.H.G.S.X.
0.6582.10.96Zm.18590.1.A1_atAW562614exostosin-like-1e+0At5g22930unknown proteinO.I.H.G.S.X.
0.6179.50.97ZmAffx.240.1.S1_atAI670252--3e+0At5g11610exostosin family proteinO.I.H.G.S.X.
0.5875.10.97Zm.15852.2.S1_a_atAY108720.1--1e-41At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinO.I.H.G.S.X.
0.5775.10.97Zm.1546.3.A1_x_atCK369824--1e-6At1g15270-O.I.H.G.S.X.
0.5674.40.97ZmAffx.1097.1.S1_atAW120085--1e+1At5g25770unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.998.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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