Co-expression analysis

Gene ID Zm.8241.1.A1_at
Gene name ribosome-like protein
Homology with ArabidopsisSimilar to At5g42635: glycine-rich protein (HF=2e+0)
Module size 19 genes
NF 0.14
%ile 9.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.20.89Zm.8241.1.A1_atBM349920ribosome-like protein-2e+0At5g42635glycine-rich proteinO.I.H.G.S.X.
0.3641.30.92Zm.4978.1.A1_atAW331789patellin-1-1e-1At5g37590bindingO.I.H.G.S.X.
0.3641.30.94Zm.13062.1.A1_atBG268629Hypothetical protein LOC100193834-2e-1At4g33750-O.I.H.G.S.X.
0.3336.00.93Zm.2714.1.A1_atAW066984phosphatidate cytidylyltransferase-4e-1At5g53910(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.2318.60.94Zm.17167.2.S1_atAY106899.1--5e-1At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedO.I.H.G.S.X.
0.2115.50.94Zm.8932.1.A1_atCA400910hypothetical protein LOC100279793-4e-11At4g26640WRKY20O.I.H.G.S.X.
0.2014.20.96Zm.9470.1.A1_atCK985751--6e+0At3g46640PCL1 (PHYTOCLOCK 1)O.I.H.G.S.X.
0.2014.20.95Zm.5396.1.S1_atAY112168.1Hypothetical protein LOC100216913-8e-5At1g53645hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1710.60.94Zm.16321.1.A1_atAI795634--3e-2At4g36480ATLCB1 (LONG-CHAIN BASE1)O.I.H.G.S.X.
0.1710.60.95Zm.4796.1.A1_a_atCF632458hypothetical protein LOC100279432 /// protein mago nashi-1e-16At1g02140MAGO (MAGO NASHI)O.I.H.G.S.X.
0.158.60.94Zm.2870.1.A1_atAW076473--1e-19At3g09840CDC48 (CELL DIVISION CYCLE 48)O.I.H.G.S.X.
0.147.70.96Zm.12955.1.A1_atCA402356--6e-1At3g05741enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.
0.147.70.95Zm.4510.1.A1_a_atCF636202hypothetical protein LOC100277304-6e-1At5g24879unknown proteinO.I.H.G.S.X.
0.136.80.94Zm.17549.2.A1_atAW267524hypothetical protein LOC100272329-3e-1At5g14160F-box family proteinO.I.H.G.S.X.
0.136.80.95Zm.13580.1.A1_atAI677218lipase-4e-1At4g14270-O.I.H.G.S.X.
0.136.80.96Zm.16535.1.A1_atCD435318Alpha-tubulin-0At4g14960TUA6O.I.H.G.S.X.
0.136.80.96Zm.14014.1.A1_a_atCF050089NADH-ubiquinone oxidoreductase 23 kDa subunit /// NADH-ubiquinone oxidoreductase 23 kDa subunit-2e-62At1g79010NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY)O.I.H.G.S.X.
0.041.50.92Zm.2671.1.S1_atAW066803--3e+0At1g26150PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10)O.I.H.G.S.X.
0.041.50.91Zm.14147.1.A1_atCD432997hypothetical protein LOC100273349-6e-13At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.899.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.999.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.599.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.398.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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