Co-expression analysis

Gene ID	Zm.8233.3.S1_a_at
Gene name	hypothetical protein LOC100194283 /// splicing factor, arginine/serine-rich 7
Homology with Arabidopsis	Similar to At4g31580: SRZ-22 (HF=5e-7)
Module size	6 genes
NF	0.40
%ile	46.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.0	0.94	Zm.8233.3.S1_a_at	BQ294345	hypothetical protein LOC100194283 /// splicing factor, arginine/serine-rich 7	-	5e-7	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.95	Zm.8584.1.A1_at	BM340099	-	-	4e+0	At2g31430	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.95	Zm.10799.1.S1_at	AY108939.1	hypothetical protein LOC100192060	-	3e+0	At5g20110	dynein light chain, putative	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.95	Zm.10456.1.S1_at	BQ577859	hypothetical protein LOC100277504	-	8e+0	At2g21880	ATRAB7A	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.95	Zm.17967.1.A1_at	CK827121	-	-	3e-5	At4g09520	catalytic/ metal ion binding / phosphoglycerate mutase	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.95	Zm.13669.1.S1_x_at	AY107043.1	-	-	2e-1	At3g26420	ATRZ-1A	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.6	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM253254	ZM_24h_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
11.3	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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