Co-expression analysis

Gene ID	Zm.8215.1.A1_at
Gene name	anther-specific proline-rich protein APG
Homology with Arabidopsis	Similar to At4g30140: GDSL-motif lipase/hydrolase family protein (HF=8e-4)
Module size	40 genes
NF	0.23
%ile	18.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.97	99.9	0.94	Zm.8215.1.A1_at	CO532014	anther-specific proline-rich protein APG	-	8e-4	At4g30140	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.17701.1.S1_at	CK370965	hypothetical protein LOC100278172	-	4e-1	At4g19400	actin binding	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.96	Zm.5533.1.A1_at	BM075731	hypothetical protein LOC100193863	-	7e-2	At1g27220	paired amphipathic helix repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.97	Zm.13759.1.S1_at	CD441609	-	-	6e-15	At5g63840	RSW3 (RADIAL SWELLING 3)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	Zm.2789.1.A1_at	CO518764	-	-	5e+0	At2g39960	microsomal signal peptidase 25 kDa subunit, putative (SPC25)	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.95	Zm.4310.1.A1_at	BM078907	ornithine carbamoyltransferase	-	3e-8	At1g75330	OTC (ORNITHINE CARBAMOYLTRANSFERASE)	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.97	Zm.6327.1.A1_at	CF636380	-	-	8e-1	At5g63030	glutaredoxin, putative	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.481.1.A1_at	AF227632.1	mismatch binding protein Mus3	-	2e-8	At4g02070	MSH6 (MUTS HOMOLOG 6)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.97	Zm.1382.1.S1_at	BQ528972	hypothetical protein LOC100194328	-	1e-1	At4g33130	-	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.97	Zm.319.1.S1_x_at	CF019792	basal layer antifungal peptide	-	5e+0	At1g38790	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.96	Zm.1162.1.S1_at	AY106160.1	-	-	9e-17	At5g04170	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.96	Zm.6922.1.A1_a_at	CF635586	hypothetical protein LOC100191806 /// hypothetical protein LOC100272427	-	2e-25	At4g31300	PBA1	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.96	Zm.6532.6.A1_at	CK370644	hypothetical protein LOC100272908 /// abscisic stress ripening protein 2 /// abscisic stress ripening protein 2	-	1e-1	At1g62060	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.95	Zm.4018.1.A1_at	CF637940	hypothetical protein LOC100192102	-	9e-127	At5g28840	GME (GDP-D-MANNOSE 3',5'-EPIMERASE)	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.97	Zm.15663.1.S1_at	CD437366	alpha-6-galactosyltransferase	-	7e-4	At4g37690	galactosyl transferase GMA12/MNN10 family protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.97	Zm.5988.1.A1_at	AI666062	legume lectins beta domain containing protein	-	8e-1	At5g48350	nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.96	Zm.6456.1.A1_at	AY107553.1	-	-	2e+0	At4g11175	translation initiation factor IF-1, chloroplast, putative	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.97	Zm.10284.1.S1_at	BM736317	-	-	2e+1	At5g38300	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.97	Zm.6946.2.A1_at	CO528668	Hypothetical protein LOC100191975	-	3e-6	At1g11680	CYP51G1 (CYTOCHROME P450 51G1)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.96	Zm.17657.1.A1_at	CK369553	-	-	2e-2	At4g28550	RabGAP/TBC domain-containing protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.96	Zm.12622.1.A1_at	BU051177	hypothetical protein LOC100278739	-	3e+0	At5g09850	transcription elongation factor-related	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.5712.1.A1_at	AI637069	-	-	1e+1	At5g19875	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.2592.1.S1_at	BM351079	hypothetical protein LOC100191248	-	1e-5	At5g20720	CPN20 (CHAPERONIN 20)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.6275.1.S1_at	AF540907.1	benzoxazin6	-	7e-1	At1g06640	2-oxoglutarate-dependent dioxygenase, putative	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.2807.1.A1_at	BM334793	zinc-finger protein 1	-	7e-1	At5g57345	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.5953.1.A1_at	BM334343	hypothetical protein LOC100280427	-	2e+0	At5g65130	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.96	Zm.15453.1.A1_at	CD437208	-	-	3e-10	At2g01440	ATP binding / ATP-dependent DNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.98	Zm.16813.1.S1_at	AI649555	-	-	2e+0	At5g24870	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.95	Zm.4.1.S1_a_at	CD434423	ferredoxin3	-	2e+0	At1g10960	ATFD1 (FERREDOXIN 1)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	Zm.14436.1.A1_at	AF326491.1	plasma membrane integral protein ZmPIP2-1	-	1e-30	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.97	Zm.5570.1.A1_at	CF646219	hypothetical protein LOC100191759	-	2e-4	At4g24890	PAP24 (PURPLE ACID PHOSPHATASE 24)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.95	Zm.10332.2.A1_at	BQ619505	-	-	2e+0	At3g28990	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.98	Zm.6206.1.S1_at	AY109453.1	-	-	5e-16	At3g09500	60S ribosomal protein L35 (RPL35A)	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.97	Zm.5654.1.A1_at	BG874013	hypothetical protein LOC100280184	-	5e-1	At5g61200	-	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.96	Zm.161.2.S1_a_at	X70153.1	protein b-32	-	9e-2	At1g65270	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.97	Zm.1011.1.S1_at	BM073180	hypothetical protein LOC100192700	-	3e+0	At1g35242	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.96	Zm.14937.1.A1_at	CB816489	-	-	3e-1	At5g04780	-	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.98	Zm.9846.1.A1_at	BM340911	-	-	8e-2	At1g04445	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.95	Zm.7143.1.S1_at	AF061107.1	myc transcription factor7	-	1e+0	At5g46760	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.12	5.9	0.96	Zm.401.1.A1_at	AF038586.1	pyruvate dehydrogenase kinase isoform 2	-	1e-11	At3g06483	PDK (PYRUVATE DEHYDROGENASE KINASE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.9	97.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
5.0	96.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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